Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0052 ATGTTTATGATGGATAGAATTGTTGATCCACACTATGCTGAAAATAATGCTTCTTTCTCCATCATGGGTAATGATTTCTCTGCTACAGTCCTTAACTACATAAACCAAATGCTCAATGATGAAGAGGACATGGACAAGTCCTATATGTTTCATGATTCCCTTGCTCTCCAAGCCACTGAAAAATCATTTTATGAACTCATTGGTAACAAGTACCCTTCTACTTTCACACACTATCTTCACAACTATCCCACTATAGAGAACCCTTACCATGATTATAGTATTAGTAGTGACAGCACTTACTGCATTACTAGTACTACCAACTCCAATGAGTCTCACTCTCACCACAGTAGTATTCTTCCTATGCATTACCACTCTGTTCCTTCTAACTTTGTTCTCCACTCCAAGTCAACCTCTATAACTCAATCTTCCATGAAGCACATGAGTGACTTCTCTACAACAAATAGTGAGTTTTCCGAGACTTCCGTGCCTGCGATTTTTTATTCAATGTCGCTTGGCGAAAAAGGGTATCTCATGCAAATTGAAAGAGGTATGAAGAAAGATACTAAGCAAGTGATGATTAACGCAGAAGGTGATGAAGGGGAGCATAAGAACCGTGACTCGGATGGAAGGAAAAATCGCAAGCGCGAAGATAAAAGAGAACTAGAAGAAGGGAGAAGCAACAAGCATTCAGCAGTGTACGTGGATGAGAATGAACTATCAGAAATATTTGATAAGGTACTATTTGGCACTGGTTTAGGAAAAAGATCTAATATGATCACACTGCAGCAAAATGAAAAATCATACATGCATGGCTGTGGAAAGAACCGTGCCAAGAAACAGGTCAAAAATGAGAAAGTTGTGGATCTTAGGACACTATTGATGCTATGTGCACAAGCTATCTCTTCTAATAACCATTCAACTGCCAAAGAGTTATTGAAGCAGATTCAGCAACATTCTTCTTCAATAGGTGATGGAACTCAGAGGATGGCTCATTGCTTTGGAAATGCCCTTGAAGCACGTTTGGCAGGAACAGGTACTCAGATTTATAGTACTTTATCATCAAAAGGAGCCTCAGCTGCAGAGATGGTAAGAGCTTATGAAATGTATGATTCAGCATGTCCATTTGATAAGCTTGAAATCATTTTTGCATTGAATTCAATTTGGAGTGTAGCCAAAGAAGCCGAAACTCTTCATATTGTAGACTTCGGTATCAATTATGGTTTCAAATGGCCTGCACTTATCCGTCGTCTTTCACAACGACCTCATGGGCCACCCAAGCTACGCATCACAGGTATAGAGCTTCCACAACCTGGTTTCAGGCCAGAGGAGAGAGTCCACGAGGCCGGGCGCCGCCTTGCGAGTTACTGCAAACGCTTCAACGTTCCATTTGAGTACAATGCTATTGTACAAAAAAAATGGGAAAGCATCAAAATTGAGGACCTTAAGATAGTGAAAAATGAGGTTGTGGCTGTGAATTGTATGTTTCGTTTCGAGAATCTACTTGATGAGACAGTTCTGGTAAATAATCCGAGGGACGCTGTTTTAGACTTAATAAGAAGGTTAAATCCTAGTATATTTGTTCATGGTATTATCAACGGGTGCTACGATGCACCGTTCTTTGAGACACGGTTAAGGGAAGCTCTTTTACATTACTCTGCAATGTTTGATATTTTAGACACTAATGTTGGACTTGAAGATCCAATGAGGTTGAAGTTTGAGGAGTTGTTTGGGATGGAAGTAATGAATGTTATAGGTTGTGAGGGTTGTGAGAGAGTTCATAGGCCTGAGACATATAAGCAGTGGCAGATTAGGAACAAGAAAATTGGGTTTAAGCAACTGTCTCTGGATCAGAAAATAGTTAACAAGTTAAAGGATAGGTTGAGAAATGATGAGTACCACAGTGATTTCATGCTTGAAGTGGATAGAAAGTGGGTGCTACAAGGTTGGAAAGGTAGAATTCTACGTGCTTCCTCATGCTGGGTACCACTATAA 1992 0.4006 MFMMDRIVDPHYAENNASFSIMGNDFSATVLNYINQMLNDEEDMDKSYMFHDSLALQATEKSFYELIGNKYPSTFTHYLHNYPTIENPYHDYSISSDSTYCITSTTNSNESHSHHSSILPMHYHSVPSNFVLHSKSTSITQSSMKHMSDFSTTNSEFSETSVPAIFYSMSLGEKGYLMQIERGMKKDTKQVMINAEGDEGEHKNRDSDGRKNRKREDKRELEEGRSNKHSAVYVDENELSEIFDKVLFGTGLGKRSNMITLQQNEKSYMHGCGKNRAKKQVKNEKVVDLRTLLMLCAQAISSNNHSTAKELLKQIQQHSSSIGDGTQRMAHCFGNALEARLAGTGTQIYSTLSSKGASAAEMVRAYEMYDSACPFDKLEIIFALNSIWSVAKEAETLHIVDFGINYGFKWPALIRRLSQRPHGPPKLRITGIELPQPGFRPEERVHEAGRRLASYCKRFNVPFEYNAIVQKKWESIKIEDLKIVKNEVVAVNCMFRFENLLDETVLVNNPRDAVLDLIRRLNPSIFVHGIINGCYDAPFFETRLREALLHYSAMFDILDTNVGLEDPMRLKFEELFGMEVMNVIGCEGCERVHRPETYKQWQIRNKKIGFKQLSLDQKIVNKLKDRLRNDEYHSDFMLEVDRKWVLQGWKGRILRASSCWVPL* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0052 663 Pfam GRAS domain family 289 660 IPR005202 -
Lan3g0052 663 ProSiteProfiles GRAS family profile. 280 661 IPR005202 -
Lan3g0052 663 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 662 IPR005202 -
Lan3g0052 663 PANTHER SCARECROW-LIKE PROTEIN 14 23 662 - -
Lan3g0052 663 MobiDBLite consensus disorder prediction 194 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0052 Lan-Chr3 350567 353108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0052 30 662 GRAS Transcription Factor Family AT1G07530 46.930 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan3g0052 GRAS 5.6e-104 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0052 - - ahf:112736647 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0090 10 532829 535951 Lan3g0052 3 350567 353108 LSH
Lan3g0052 3 350567 353108 Lan13g0320 13 2103452 2106323 PCT
Lan13g0319 13 2098090 2100837 Lan3g0052 3 350567 353108 PCT