Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0051 ATGATCTTGGTATCTTCATCTAAAATGTATAAAAGCTATATACTGAATTTCCTCCTCCTCATCATCATCATCCTCTATTTAAGTGAAACACAAGCTGCATTTGGTGTTAGCGGTGGTGTAGGTGTAGGTGTTGGTGTTGGCAGTGGTGGAGTGGTTTGGGTTGGTGGAAGGATTAACAGCCCAGAGACACCTAGATCTTCATTTCCAAAGCTGAATGAAGCTTACACTGCACTTCAGGCTTGGAAATCTGCAATTACTGATGACCCTCTAAAGATTTTAGATACTTGGGTTGGTCCTAATGTGTGTTCTTACAAAGGAGTCTTTTGTTCAAATCCTCAAGATGAAATGGTTTCATCAACTTTACTTGTTTCAGGCATAGATCTTAACCATGCAAATCTCCAAGGAGTTCTTGTTAAAGAGCTTTCTTTACTCACTGATATGTCTCTTTTTCACCTCAATAGTAATAGGTTCACTGGCATAGTTCCTGATACATTCAGAGATCTCACATCATTGGAAGAGTTAGACCTCAGCAACAACCAACTTTCAGGTCCTTTTCCTTCTGTCACTTTATACATGCCAAGCCTCATATACTTGGACATAAGGTTCAACTCCTTCTCAGGTTCTCTGCCTCAAGAACTTTTCAATAAGAATCTTGATGCAATATTTGTCAACAACAATCAATTTGAAGGAGAAATACCTCAAAACTTGGGTAATTCTCCTGCTTCTGTGATAAATTTAGCCAACAACAAGCTCAGTGGAAACATTCCAGCAAGTTTTGGCTTCATGGGTTCTAAAGTAAAAGAGATTCTCTTCCTTAATAACCAGTTAACTGGTTGCATTCCTGAAGGAGTTGGGTTATTCACAGAGATGCAAGTTCTGGATGTGAGCTTCAATTCACTCATGGGCCATGTTCCTGACACAATATCTTGCCTGCAAGATATACAAGTTCTTAATTTGGCACATAACATGCTTTCTGGTGAGTTATCAGATGTACTATGCTCTCTTAGAAGCCTTGCAAATCTAACAATTGCTTACAATTTCTTCTCTGGGTTCAGCCAACAATGCTCAAAGCTTTTCTTTAGGAATATTGGTTTTGATTTTTCACTTAACTGCATTCCTGGAAGGGACATGCAAAGACCTCAACCTGAATGCTCAATGATACCAGGCAGTAGCCTAAGTTGTATCAGAATTCCTACACCAAACCCTCTTGTTTGTGCTGCCTTGGTTGTAAGTAGTAGTACCACTAAGAACACTCATCATAGTTCACCATCACAATCTCCTTGA 1284 0.3933 MILVSSSKMYKSYILNFLLLIIIILYLSETQAAFGVSGGVGVGVGVGSGGVVWVGGRINSPETPRSSFPKLNEAYTALQAWKSAITDDPLKILDTWVGPNVCSYKGVFCSNPQDEMVSSTLLVSGIDLNHANLQGVLVKELSLLTDMSLFHLNSNRFTGIVPDTFRDLTSLEELDLSNNQLSGPFPSVTLYMPSLIYLDIRFNSFSGSLPQELFNKNLDAIFVNNNQFEGEIPQNLGNSPASVINLANNKLSGNIPASFGFMGSKVKEILFLNNQLTGCIPEGVGLFTEMQVLDVSFNSLMGHVPDTISCLQDIQVLNLAHNMLSGELSDVLCSLRSLANLTIAYNFFSGFSQQCSKLFFRNIGFDFSLNCIPGRDMQRPQPECSMIPGSSLSCIRIPTPNPLVCAALVVSSSTTKNTHHSSPSQSP* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0051 427 SUPERFAMILY L domain-like 75 357 - -
Lan3g0051 427 Pfam Leucine rich repeat N-terminal domain 72 110 IPR013210 -
Lan3g0051 427 ProSiteProfiles Leucine-rich repeat profile. 170 191 IPR001611 GO:0005515
Lan3g0051 427 Pfam Leucine rich repeat 150 204 IPR001611 GO:0005515
Lan3g0051 427 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 9 424 - -
Lan3g0051 427 Gene3D Ribonuclease Inhibitor 240 362 IPR032675 -
Lan3g0051 427 PRINTS Leucine-rich repeat signature 171 184 - -
Lan3g0051 427 PRINTS Leucine-rich repeat signature 311 324 - -
Lan3g0051 427 PANTHER LRR/EXTENSIN 9 424 - -
Lan3g0051 427 Gene3D Ribonuclease Inhibitor 72 239 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0051 Lan-Chr3 348835 350365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0051 69 385 Leucine-rich Repeat extension Gene Families AT3G24480 50.789 2.56e-107 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0051 - - gmx:100775544 640.573