Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0048 ATGACAAATTCCATTGGATTAACACTCTTCTTGATGCTTTGTCTTGGTCTTGGAATTTTGGTTCATGCACAGCAACAAACAGGCTTTATAAGCATTGATTGTGGTGGTCCAGAGAATTTTGAATACACAGATGACACTACTAATATAAAGTACAACACTGATGGAGCTTACATAAACACAGGCTTTAACAAAAACATTTCTTTTGAGTATGCATACCCAAATAATCCTAACCTTCCATTACCACTCTCAGATGTTAGATGTTTTCCTCAGGGAGAGAGAAATTGTTACAGCTTAAAAGCTGGAAGAAGAGGCAGAACAAATTTGATAAGAGCTTCATTCATGTATGGAAACTATGATGGAGAAAACAAGTTACCAGAGTTTGATATCTATGTTGGTGCTAATTTCTGGTCACTAGTGAAATTCAGAAATGCTTCTGAGCAAGTTGTATTGGAAATAATCAGTATAGCACAATCAGATGTGATATATGTTTGTCTTGTGAACAAAGGATCAGGAACTCCTTTTATCTCAGCATTGGAACTTAGACCACTCAATAGTTCAATTTATAATACCGAGTTTGGTGAATCTGCTTCATTGTTACTTTTCGAAAGATGGGATATTGCATCATCAGCACTCAATGGAAGTGGTAGATATGTAGATGATATTTATGATCGAATTTGGTCCCCTTATAGTTCCTCTACCTGGGACTCAATCAGCACATCCTCGGCAATAGATGTGAATACTGATGGCTATAGAGCGCCGTCTGAAGTAATCAAAACTGCTGCTAGACCAAGGAATGGTAGTGATACTTTGGAATTTTCTTGGAGCTCAAATGATCCAAGTTGGAAATTTTATGTGTACTTGTACTTTGCTGAAGTGGAGCATCTTAAGAAAACCCAACTTAGGAAATTCAATGTATCATGGAATGGATCTCCTTTGTTTGAACCTTTTGTACCAAGCTACTTATATGCAACCACTTTATCTAATTCAAAATCCTTGGTAGCAAATGAACATCGAATTTCTATACACAAAACCGCAGATTCAACGCTTCCTCCCATTCTTAATGTGGTTGAGATTTATGTAGTAAGACAGATGGATGCACTACCAACATTTGAACAAGATGTTGATGCTGTAATGGACATTAAAGAAGATTATAGAGTTCAAAGAAATTGGATGGGTGATCCATGTGAGCCAAAGAACTATTCTTGGGAGGGCTTAAAATGCAACTATAGCACTTCATTTCCTCCGCGAATTGTATCACTGAATCTGAGTTCAAGCAGCTTAAGTGGAATAATAGCTTCATCCATTTCCAATCTCTCTTCACTGGAATCTTTGGATTTATCTAACAATACTTTAACTGGGTCAGTGCCTCAGTTTTTGGAAGAATTGAGATCCCTTAAATACTTGAATTTAAAGGGTAACCAGCTTTCAGGATCTGTCTCAACAAGTCTTATAGAAAGATCAAGGGATGGATTACTTATGCTGAGTGTGGATGATCAAAATCTATCGAACTCGGATACAAGTAACAAGAATAAAGTTGTTGTTCCTATAGTAGCATCAGTATTATCAGTTTTAGCTCTATTGGTTGTTTTCATTCTCATTTGGAAACTTAGAAAAAGGAAACAATCAGATGAGGAGATTAACAAGCCCAACAAAGAAGGAAGAACAGTAGCATCAAAAAATTGGCAATATACATATTCTGAGGTGTTGAACATCACAAACAACTTTGAAATGGTGATTGGGAAGGGAGGATTTGGAACTGTGTACTTCGGTAAGATGAAAGATGGCAAGCAAGTTGCAGTGAAGATGCTTTCGCCATCATCATCTCAAGGGCCAACAGAATTTCAGACCGAGGCTGAGCTATTGATGACAGTTCATCACAAAAACTTGGTATCCTTCATTGGATACTGTGATGATGATGATAACAAGATGGTACTCATATATGAGTACATGGCCAATGGAAACCTTAAACATTATCTCTCAGATATAAATCCAGATTGCTTGAGTTGGGAAAAGAGACTTCAGATAGCGATCGATGCTGCAGAAGGATTGGATTACCTACACCATGGATGCAAGCCACCAATAATACATAGGGATGTGAAGTCAGCCAACATTCTTTTAAGTGAAGATTTGGAAGCTAAGATAGCAGATTTTGGCCTATGCAAGGTGTTTGGGAATGATAAGCAAAATGCAGAAGCTGTAGTCATGGGCACTACAGGGTACCTTGACCCTGAGTACTACAAACTTAGGCATTTGAATGAGAAAAGTGATGTTTACAGCTTTGGAATTGTTCTATTGGAATTAATCACAGGTCGACCTGCAGTATTAAAAGGCAAGATATTAATGCATATACTTGAATGGATAACACATGAGGTTGAAAGAGGTGATTTGAGCAGAATTATAGATCCAAGGCTACAAGACAAATATGATGCAAGTTCAGTGTGGAAAGCAATAGGAATAGCAATGGCATGCACTGCATCAACATCCATTCAAAGACCAACAATGAGTGTTGTGTTAGCAGAGTTAAAACACTGTTTTAAAATGGATTTGCCTAGTCAAAATCATATATTTGTAGACTCAAGACCAAGACAGAGCTATACTGAATTTTATAGTTCATCTGAACCATATTCTATGGATAGTGACTCTATCACCCATCCTTTCCCAAGGTAG 2667 0.3738 MTNSIGLTLFLMLCLGLGILVHAQQQTGFISIDCGGPENFEYTDDTTNIKYNTDGAYINTGFNKNISFEYAYPNNPNLPLPLSDVRCFPQGERNCYSLKAGRRGRTNLIRASFMYGNYDGENKLPEFDIYVGANFWSLVKFRNASEQVVLEIISIAQSDVIYVCLVNKGSGTPFISALELRPLNSSIYNTEFGESASLLLFERWDIASSALNGSGRYVDDIYDRIWSPYSSSTWDSISTSSAIDVNTDGYRAPSEVIKTAARPRNGSDTLEFSWSSNDPSWKFYVYLYFAEVEHLKKTQLRKFNVSWNGSPLFEPFVPSYLYATTLSNSKSLVANEHRISIHKTADSTLPPILNVVEIYVVRQMDALPTFEQDVDAVMDIKEDYRVQRNWMGDPCEPKNYSWEGLKCNYSTSFPPRIVSLNLSSSSLSGIIASSISNLSSLESLDLSNNTLTGSVPQFLEELRSLKYLNLKGNQLSGSVSTSLIERSRDGLLMLSVDDQNLSNSDTSNKNKVVVPIVASVLSVLALLVVFILIWKLRKRKQSDEEINKPNKEGRTVASKNWQYTYSEVLNITNNFEMVIGKGGFGTVYFGKMKDGKQVAVKMLSPSSSQGPTEFQTEAELLMTVHHKNLVSFIGYCDDDDNKMVLIYEYMANGNLKHYLSDINPDCLSWEKRLQIAIDAAEGLDYLHHGCKPPIIHRDVKSANILLSEDLEAKIADFGLCKVFGNDKQNAEAVVMGTTGYLDPEYYKLRHLNEKSDVYSFGIVLLELITGRPAVLKGKILMHILEWITHEVERGDLSRIIDPRLQDKYDASSVWKAIGIAMACTASTSIQRPTMSVVLAELKHCFKMDLPSQNHIFVDSRPRQSYTEFYSSSEPYSMDSDSITHPFPR* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0048 888 Gene3D - 209 361 - -
Lan3g0048 888 Pfam Protein tyrosine and serine/threonine kinase 576 838 IPR001245 GO:0004672|GO:0006468
Lan3g0048 888 SUPERFAMILY L domain-like 389 501 - -
Lan3g0048 888 SMART serkin_6 573 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0048 888 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672|GO:0006468
Lan3g0048 888 Gene3D Phosphorylase Kinase; domain 1 545 649 - -
Lan3g0048 888 Gene3D Ribonuclease Inhibitor 364 489 IPR032675 -
Lan3g0048 888 ProSitePatterns Protein kinases ATP-binding region signature. 579 601 IPR017441 GO:0005524
Lan3g0048 888 PANTHER BNAC07G41790D PROTEIN 9 859 - -
Lan3g0048 888 Pfam Malectin-like domain 32 360 IPR024788 -
Lan3g0048 888 CDD STKc_IRAK 579 842 - -
Lan3g0048 888 PANTHER OS07G0107800 PROTEIN-RELATED 9 859 - -
Lan3g0048 888 ProSiteProfiles Protein kinase domain profile. 573 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan3g0048 888 Gene3D Transferase(Phosphotransferase) domain 1 650 857 - -
Lan3g0048 888 PRINTS Leucine-rich repeat signature 441 454 - -
Lan3g0048 888 PRINTS Leucine-rich repeat signature 462 475 - -
Lan3g0048 888 Pfam Leucine rich repeat 416 475 IPR001611 GO:0005515
Lan3g0048 888 SUPERFAMILY Protein kinase-like (PK-like) 558 841 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0048 Lan-Chr3 319739 324395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0048 9 854 Receptor kinase-like Gene Family AT4G29180 53.057 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lan3g0048 Malectin_like 3.6e-108 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0048 - - gmx:100793137 1269.99