Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0018 ATGGGTGTGATAAAGGCAGCACTAGGAGATGCAATCTTAACATCATTGTGGGTTTTTTGTTCCTCAACACTTAGGATTCTCACTGCTCAGGTAGCTGTTTTTCTTGGTCTACAACATGTTTCACTTGCAGGCCTCTTCATCTCCACAATCCTAGCTACTATTCTTGTCTTCACCATAAGCTTCATTGGAAGCAGGCTCTTAGGTGGTGCTAGATTCAACCCTTCAACCACTATTTCCTTCTATACTGCAGGTCTCAGGGCTGATTCAACACTTGCATCCATGGCTGTGAGTTTTCCTGCTCAGGCAGCAGGTGGCGCTTTTGGTGCAAAAGGTATCCTTCAAGTGGTGCCAACACAGTACAAACACATATTGAAGGGTCCATCTTTGAAGGTTGACTTGCATACTGGAGCTGTGGCTGAGGGTGTGTTGACTTTTGCTTTTAACTTGGTTATCCTATTAATCATGATCAAGGGTCCTAAGAACCCACTGTTGAAGGTGTATTTGGTTGCTGTGGCAACTGTAGCTTTGGTTATTCCAGGTTCTCACTACACAGGGCCTTCTATGAACCCTGCTAATGCATTTGGATGGGCTTATGTGTACAACAAGCACAATACTTGGGATCACTTTTATGTTTATTGGATATGTCCTTTTATAGGTGCAATCTTAGCTGGGTTGCTCTTCAGGTTTCTATTTATTTCACCAGTTAAGCAGAAGAAAGCTTGA 723 0.4315 MGVIKAALGDAILTSLWVFCSSTLRILTAQVAVFLGLQHVSLAGLFISTILATILVFTISFIGSRLLGGARFNPSTTISFYTAGLRADSTLASMAVSFPAQAAGGAFGAKGILQVVPTQYKHILKGPSLKVDLHTGAVAEGVLTFAFNLVILLIMIKGPKNPLLKVYLVAVATVALVIPGSHYTGPSMNPANAFGWAYVYNKHNTWDHFYVYWICPFIGAILAGLLFRFLFISPVKQKKA* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0018 240 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan3g0018 240 PRINTS Major intrinsic protein family signature 53 77 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan3g0018 240 PRINTS Major intrinsic protein family signature 139 157 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan3g0018 240 PRINTS Major intrinsic protein family signature 170 192 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan3g0018 240 PRINTS Major intrinsic protein family signature 210 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan3g0018 240 SUPERFAMILY Aquaporin-like 3 234 IPR023271 -
Lan3g0018 240 Gene3D Glycerol uptake facilitator protein. 2 239 IPR023271 -
Lan3g0018 240 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 240 - -
Lan3g0018 240 Pfam Major intrinsic protein 4 227 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan3g0018 240 PANTHER AQUAPORIN SIP1-1 1 240 IPR044222 GO:0015250
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0018 Lan-Chr3 183271 184620 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0018 1 231 Major Intrinsic Protein MIP AT3G04090 48.485 2.22e-68 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0018 K09875 - gmx:100797126 321.242