Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0014 ATGCATTTTCCCTTCAATTCTACCTCCGATCTTCTTCCCAACTTTGATTCAATGGAACTCCATTCCACTCACGATTCCACGCCTGAAGGAGGACAGCGCCTTCCGGATCCACCGTCTTCCGCCGCCGGATCTCCGCTCCAACATAATCCTCTGCCCGGGCCCAGGCTGGCTCCCAATTATACACTCGTCAATGCAATTTCGGACAAGAAGGAGGACGGTCCGGGGCCTCGCTGTGGCCACACGCTAACGGCAGTCGCGCCTGTTGGAGAACCGGGGACGCCGGGGTACATTGGTCCCAGGCTCATTCTGTTCGGTGGTGCCACCGCACTTGAAGGCAATTCCGCTGCTTCAGGGACTCCTTCATCTGCTGGAAATTCTGGCATACGTTTAGCTGGTGCCACAGCTGATGTCCACTCTTATGATGTCTTGACTAATAAATGGTCTAGGCTAACTCCTTTTGGAGAACCTCCAACTCCAAGGGCTGCACATGTGGCGACTGCTGTGGGAACCATGGTGGTTATTCAGGGTGGCATTGGTCCTGCTGGTTTGTCAGCAGAGGACCTTCATGTTCTTGATCTCACTCAGCAATGGCCCCGGTGGCATAGAGTGTCAGTTCAAGGCCCAGGACCGGGGTCACGTTATGGACATGTAATGGCTCTGGTGGGGCAGAGGTATCTTATGGCAATTGGAGGCAATGATGGGAAGAGACCTTTGGCTGATGTATGGGCTCTGGACACAGCTGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGTCCACCTCCTTGCATGTATGCAACTGCGAGTGCACGCTCTGATGGACTTCTTCTGCTTTGTGGAGGGAGGGATGCCAATAGTGTTCCATTGGCAAGTGCATATGGACTTGCTAAGCATAGAGATGGACGCTGGGAATGGGCAATTGCCCCGGGTGTCTCACCGTCTTCCAGATATCAGCATGCAGCGGTATTTGTCAATGCAAGGCTCCATGTGTCTGGTGGGGCTCTAGGTGGAGGACGAATGGTAGAAGACTCATCAAGTGTTGCTGTATTGGACACTGCTGCTGGTGTTTGGTGTGACACAAAATCTGTTGTTACAAGTCCAAGAACTGGTAGGTACAGTGCTGATGCTGCTGGAGGAGATGCCGCAGTCGAGTTGACCCGGCGTTGTAGGCATGCAGCTGCTGCTGTTGGTGACCTAATTTTCATTTATGGTGGTTTACGTGGGGGAGTCTTACTAGATGACCTACTTGTTGCTGAGGATCTTGCTGCTGCTGAAACAACAACTGCTGCTTTACATACTGCTGCCGCAGCAGCCGCAATTAATGATCAAGCAGGACACTTACCTGGACGATATGGATTTCTTGATGATAGGAGTAGGCAAACCATGCCTGAAGCTGCTGCTGCTGCTGATGGTGCTGACATTCATACTGATATCAGCACAGAGAATGCCATGCTTCAGGGATCCCGCCGTACTAGCAAAGGAGTTGAATATCTGGTTGAAGCATCAGCTGCAGAAGCTGAAGCTATCAGTCGAACACTTGCTGCTGCCAAGGCACGACAAGAGAATGGAGAAGTCGAATTGCCTGACAGAGACCGCGGGGCTGAGGCTACCCCAAGTGGAAATGAAATACCTTCCTTGGTTAAGCCTGATGCTGTGGGGACTAACAACGTTATTCCCGGTGGAGTTCGCCTGCATCACAGAGCTGTGGTGGTTGCTGCAGAGACTGGTGGCGCTTTAGGTGGCATGGTTAGACAACTTTCAATTGATCAGTTTGAAAATGAAGGCAGGCGGGTTAGTTATGGTACTCTAGAGAATGCAACTGCTGCTAGAAAATTATTTGACCGGCAGATGTCTATCAATAGTGTGCCAAAAAAGGTCATAGCACACCTCTTAAAGCCTCGTGGGTGGAAACCACCAGTTCGACGTCAGTTTTTCTTAGATTGCAATGAAATTGCTGATCTTTGTGATAGTGTTGAGCGGATATTTTCAAGTGAACCAACTGTCTTACAACTTAGGGCTCCAATTAAAATATTTGGTGATTTACATGGGCAGTTTGGGGATCTTATGCGCCTCTTTGATGAGTATGGTGCACCATCAACTGCTGGTGACATAGCATACATCGATTATCTATTCCTAGGAGATTATGTTGACCGGGGGCAACACAGCTTGGAAACTATAATCCTTCTTCTTTCTCTGAAGGTTGAGTATCCCAAAAATGTACATTTAATACGTGGAAACCATGAAGCTGCAGATATTAATGCCCTTTTTGGTTTCCGAATTGAGTGCATTGAGAGGATGGGTGAGAGAGATGGAATTTGGACATGGCATCGGATAAACCGCCTGTTCAATTGGCTTCCTCTGGCAGCCCTCATTGAAAAAAAAATTATTTGCATGCATGGTGGTATTGGTCGTTCAATAAATCACGTGGAACAGATTGAGAATATTCAGCGTCCAATTCCAATGGAAGCAGGATCAATTGTGCTTATGGATCTTTTGTGGTCTGACCCTACTGAGAATGACAGTGTGGAAGGACTGCGGCCAAATGCTAGAGGTCCCGGGTTAGTTACATTTGGGCCTGATCGTGTCATGGAATTTTGTAACAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTGATGGATGGGTTTGAACGTTTTGCCCAGGGACATCTGATCACACTTTTCTCTGCTACAAATTATTGTGGTACTGCAAATAATGCTGGAGCAATATTAGTTTTGGGTAGAGACCTTGTTGTGGTTCCTAAACTGATTCACCCATTGCCACCTGCATCTTCGCCAGAAACGTCACCAGAACGTCATATTGAAGATACATGGATGCAGGAGTTGAATGCTAACAGGCCACCAACACCAACTAGAGGCCGTCCACAAGCAACAAATGATAAAGGTTCACTGGCATGGATATAG 2940 0.4844 MHFPFNSTSDLLPNFDSMELHSTHDSTPEGGQRLPDPPSSAAGSPLQHNPLPGPRLAPNYTLVNAISDKKEDGPGPRCGHTLTAVAPVGEPGTPGYIGPRLILFGGATALEGNSAASGTPSSAGNSGIRLAGATADVHSYDVLTNKWSRLTPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQWPRWHRVSVQGPGPGSRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAALHTAAAAAAINDQAGHLPGRYGFLDDRSRQTMPEAAAAADGADIHTDISTENAMLQGSRRTSKGVEYLVEASAAEAEAISRTLAAAKARQENGEVELPDRDRGAEATPSGNEIPSLVKPDAVGTNNVIPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTLENATAARKLFDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSVERIFSSEPTVLQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETIILLLSLKVEYPKNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPIPMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPASSPETSPERHIEDTWMQELNANRPPTPTRGRPQATNDKGSLAWI* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0014 979 MobiDBLite consensus disorder prediction 955 970 - -
Lan3g0014 979 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 24 979 - -
Lan3g0014 979 SMART pp2a_7 649 933 IPR006186 GO:0016787
Lan3g0014 979 MobiDBLite consensus disorder prediction 955 979 - -
Lan3g0014 979 PRINTS Serine/threonine phosphatase family signature 677 704 IPR006186 GO:0016787
Lan3g0014 979 PRINTS Serine/threonine phosphatase family signature 712 739 IPR006186 GO:0016787
Lan3g0014 979 PRINTS Serine/threonine phosphatase family signature 745 769 IPR006186 GO:0016787
Lan3g0014 979 PRINTS Serine/threonine phosphatase family signature 783 809 IPR006186 GO:0016787
Lan3g0014 979 PRINTS Serine/threonine phosphatase family signature 873 893 IPR006186 GO:0016787
Lan3g0014 979 PRINTS Serine/threonine phosphatase family signature 895 911 IPR006186 GO:0016787
Lan3g0014 979 MobiDBLite consensus disorder prediction 522 551 - -
Lan3g0014 979 Pfam Kelch motif 319 364 IPR011498 GO:0005515
Lan3g0014 979 SUPERFAMILY Kelch motif 132 421 IPR015915 GO:0005515
Lan3g0014 979 MobiDBLite consensus disorder prediction 1 56 - -
Lan3g0014 979 SUPERFAMILY Metallo-dependent phosphatases 634 934 IPR029052 -
Lan3g0014 979 CDD MPP_Bsu1_C 629 931 IPR041758 -
Lan3g0014 979 ProSitePatterns Serine/threonine specific protein phosphatases signature. 746 751 IPR006186 GO:0016787
Lan3g0014 979 Gene3D - 184 436 IPR015915 GO:0005515
Lan3g0014 979 MobiDBLite consensus disorder prediction 525 539 - -
Lan3g0014 979 Gene3D - 592 956 IPR029052 -
Lan3g0014 979 Gene3D - 58 183 IPR015915 GO:0005515
Lan3g0014 979 PIRSF STPPP_BSU1 28 979 IPR012391 GO:0004721|GO:0009742
Lan3g0014 979 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 24 979 - -
Lan3g0014 979 MobiDBLite consensus disorder prediction 1 29 - -
Lan3g0014 979 Pfam Calcineurin-like phosphoesterase 677 884 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0014 Lan-Chr3 162623 172853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0014 641 876 Calmodulin-binding Proteins AT5G63870 29.412 6.36e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0014 - - gmx:100790406 1705.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g0014 3 162623 172853 Lan7g0400 7 2771627 2783326 PCT
Lan3g0014 3 162623 172853 Lan8g1573 8 22738615 22756862 PCT
Lan3g0014 3 162623 172853 Lan13g0452 13 3310389 3324950 PCT
Lan7g0400 7 2771627 2783326 Lan3g0014 3 162623 172853 PCT
Lan8g1573 8 22738615 22756862 Lan3g0014 3 162623 172853 PCT
Lan13g0452 13 3310389 3324950 Lan3g0014 3 162623 172853 PCT