Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0010 ATGATGTACCCTCATCAAGGAAAAAACATGCATTCTTCTTCAAGAATGGCAATCCCCTCAGAGAGGCATATGTTCCTTCAAACAGGAAATGGGGGATCGAGTGATTCCGGACTTGTGCTCTCAACTGATGCTAAGCCAAGATTGAAATGGACAACAGATCTTCATGCCAGGTTTATAGAAGCAGTCAATCAGTTAGGTGGACCTGACAAAGCAACTCCAAAAACTGTAATGAAACTCATGGGGATTCCGGGGCTTACCTTATATCATCTAAAGAGTCATCTTCAGAAGTACAGATTAAGCAAGAACCTGCATGGACAAAGCAACAATGTGATACACAAAATTGGTGCAGCAACAGGAGAAAGACTTTCTGAAACCAATGGAACAACTCAGATGAACAAATTAAGCCTTGGACCACAGGTGGCTAACAAAGATTTACATATTGGCGAGGCACTGCAGATGCAGATCGAGGTGCAGAGAAGGCTAAATGAACAACTTGAGGTACAGCGACACTTGCAGCTCCGAATAGAGGCACAAGGAAAATACCTGCAGTCTGTGCTGGAGAAAGCTCAGGATACACTCGGTAGACAGAATTTGGGAATAGTAGGACTTGAAGCTGCAAAAGTTCAGCTTTCAGAACTTGTTTCCAAAGTATCCTCTCAGTGCTTGAACTCAGCATTTTTGGAACTGAAGGAATTACAAGGATTTTGCCCTCAGCAAACACAACAGCCAAACGACTGCTCCATCGAAAGTTGCCTCACATCCTGCGACGGATCACAGAAGGAGCAAGACGTACAAAATGGTAGAAAGGCCTTAAGACACTTCAATAATGGACATAATGCATTCATGGATAGAAAGGAAAGCATAGAAGTGAATAAGAACACCTTTCTTGCACCATTAGGCAGGAATGCAGAGAGAAGTCATGGTGTAGAAAGAAATCCTAGCAACTTGTCTATGACCATTGGACTTGAAAGAGACACAGAGAAGAGAACCAATGAAGAAGGGAGAGAATCAAAAAAGGCGGTGGATGAAAATGTTTCTCAAGATTATAGGTTGCATTCTTACTTTGCAGCACCAAGATTGGACCTAAACAGAAACACACATGGAGATAATGAAGCTGCAACACAACAACTTGACTTGAATACACTCACTTGGAGCTGA 1158 0.4249 MMYPHQGKNMHSSSRMAIPSERHMFLQTGNGGSSDSGLVLSTDAKPRLKWTTDLHARFIEAVNQLGGPDKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSNNVIHKIGAATGERLSETNGTTQMNKLSLGPQVANKDLHIGEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKAQDTLGRQNLGIVGLEAAKVQLSELVSKVSSQCLNSAFLELKELQGFCPQQTQQPNDCSIESCLTSCDGSQKEQDVQNGRKALRHFNNGHNAFMDRKESIEVNKNTFLAPLGRNAERSHGVERNPSNLSMTIGLERDTEKRTNEEGRESKKAVDENVSQDYRLHSYFAAPRLDLNRNTHGDNEAATQQLDLNTLTWS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0010 385 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 102 IPR017930 -
Lan3g0010 385 MobiDBLite consensus disorder prediction 322 345 - -
Lan3g0010 385 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 384 IPR044848 GO:0003700
Lan3g0010 385 SUPERFAMILY Homeodomain-like 44 100 IPR009057 -
Lan3g0010 385 PANTHER MYB-RELATED PROTEIN 2 4 384 - -
Lan3g0010 385 Pfam MYB-CC type transfactor, LHEQLE motif 146 191 IPR025756 -
Lan3g0010 385 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 45 100 IPR006447 GO:0003677
Lan3g0010 385 Pfam Myb-like DNA-binding domain 47 98 IPR001005 -
Lan3g0010 385 Gene3D - 44 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0010 Lan-Chr3 146412 150347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0010 77 384 G2-like Transcription Factor Family AT3G04030 51.205 7.31e-89 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan3g0010 Myb_DNA-binding 6.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0010 - - gmx:100810396 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g0010 3 146412 150347 Lan7g0362 7 2488947 2491776 PCT
Lan3g0010 3 146412 150347 Lan8g1597 8 22944501 22947132 PCT
Lan7g0362 7 2488947 2491776 Lan3g0010 3 146412 150347 PCT
Lan8g1597 8 22944501 22947132 Lan3g0010 3 146412 150347 PCT