Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0006 ATGATGGAAGATCTGAAAGAGCGGCTACTACCACCAAAACCTGCATCAGCTCTAAACTTAAGAGAAACTGCAAATCGACCATCTGCATCTGGGAGGCAACCTTTACAAGGAGTTGATGTTCTGGGACTAAAGAAGCGTGGCCAAGGCCTCCGATCATGGATTCGTGTTGACACATCTGGAAACTCTCAAGCCATCGAGGTCGACAAGTTTACTATGATGCGACGTTGTGATCTGCCTGCACGTGACCTTCGTCTACTTGATCCCTTGTTTGTATATCCTTCAACAATCCTTGGTAGAGAAAAGGCAATTGTAGTGAATCTAGAGCAGATACGGTGTATTATTACAGCAGATGAGGTTCTTCTCTTGAATTCCCTTGACAGTTATGTATTTCACTATGTGATGGAGCTACAACGACGGTTGACAACAACTGGTGTAGGCGAGGTCTGGCAGACAGACAGTTCGGACATAAACCGAAGGAGAGGAAATAGGAGTTTCGAAAATGCATTTAACAACACTTCCCCTGATTATTTACCTTTTGAATTCAGGGCTCTTGAAGTTGCCCTCGAGGCAGCATGCACATTTCTTGATTCCCAGGCAGCAGAGTTAGAAATTGAGGCTTACCCATTGTTGGATGAACTGACATCAAAGATCAGTACTCTCAATTTGGAACGTGTTCGTCGGTTGAAAAGCAGGCTTGTAGCCCTGACCCGGAGGGTCCAGAAGGTTAGAGATGAGATAGAGCAACTTATGGATGATGATGGTGATATGGCTGAAATGTACCTTACCGAGAAGAAAAGGCGGATGGAGTTTTCATTCAATGGAGATCAGTCTTTGGCTGGATATAGATCAGTTGATGGTGCATCCATTTCTGCTCCAGTTTCTCCCGTTTCATCACCTCCTGAATCTCGGAGGCTGGAAAAGACGTTGAGCATTGCGAGGAGTCGGCATGAGAGCATGAGGAGTACTGAAAGTGCTACAGAAAGTATAGAAGAGCTTGAGATGTTGCTAGAAGCATATTTCGTTGTCATTGACAGCACACTAAACAAGTTGACATCGTTGAAAGAGTACATCGATGACACAGAAGATTTCATTAACATTCAATTGGATAATGTGCGTAATCAGCTTATCCAGTTTGAGCTTTTACTCACTACTGCAACATTTGTTGTTGCCATCTTTGGTGTGGTAGCAGGAATATTTGGGATGAATTTTGAAATTCCATTATTTGATGAACCCCATGCATTCAACTGGGTCCTTATAATAACAGGAGTTTGTGGAGTCTTCATATTTTGTGCATTTGTGTGGTTCTTCAAGTACAGAAGACTGATGCCCCTGTAG 1335 0.4337 MMEDLKERLLPPKPASALNLRETANRPSASGRQPLQGVDVLGLKKRGQGLRSWIRVDTSGNSQAIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVFHYVMELQRRLTTTGVGEVWQTDSSDINRRRGNRSFENAFNNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMEFSFNGDQSLAGYRSVDGASISAPVSPVSSPPESRRLEKTLSIARSRHESMRSTESATESIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPLFDEPHAFNWVLIITGVCGVFIFCAFVWFFKYRRLMPL* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0006 444 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 381 434 IPR045863 -
Lan3g0006 444 Gene3D Magnesium transport protein CorA, transmembrane region 382 442 - -
Lan3g0006 444 PANTHER MAGNESIUM TRANSPORTER MRS2-10 4 444 - -
Lan3g0006 444 Coils Coil 225 252 - -
Lan3g0006 444 Gene3D Magnesium transport protein CorA, transmembrane region 127 375 - -
Lan3g0006 444 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 4 444 IPR039204 -
Lan3g0006 444 Pfam CorA-like Mg2+ transporter protein 333 434 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lan3g0006 444 Gene3D - 40 124 - -
Lan3g0006 444 CDD Mrs2_Mfm1p-like 53 441 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0006 Lan-Chr3 115699 119484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0006 2 444 MRS2 Gene Family AT1G16010 86.261 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0006 K16075 - gmx:100779803 770.77