Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0005 ATGGAGGTGGTTGAATCAGCTCCCTTCAACAACTCTTCATCTGCTTTTGATTTGGAGTCATCTCATACATCCCCCCTTCATTTACCCAAATCATTTCAAATCAGGACCGTTTATCTTGTTTTGATTAAACCTAAGATCAACGTCTTGCTCCCCTTTGGTCCTCTCGCTATCTTACTCCATTATCTTACTCCAAAACATCATGGATGGGTCTTCTTCTTCAGCTTAATTGGTATTGCTCCTTTGGCTGAACGTCTCGGTTATGCTACTGAGCAGCTTGCCTTCTACACTGGACCAACCGTTGGAGGTCTACTCAATGCAACGTTTGGCAATGCAACTGAAATGATTATATCAATTTATGCATTGAAAAACGATATGATTAGGGTTGTTCAACAATCTTTACTTGGTTCAATCTTGTCAAATATGCTTCTAGTTCTTGGCTGTGCTTTCTTCACTGGTGGGATTATCCACCACAAGAAAGTTCAGGTTTTTAATAAGGCAGCTGCTGTTGTCAATTCTGGCTTGCTGTTGATGGCTGTCATGGGATTACTCTTTCCTGCCGTGCTTCACTTTACTCACTCAGAGCTTCATTTTGGGAAATCAGTCTTATCTCTATCAAGATTCAGCAGCTGTATAATGCTACTGGCTTATGCTAGCTACCTTTTCTTTCAACTCAGAACTCAGCAAAATCTTTATACTCCTGTTCATGAGGTAGCAGATAATAGTGAAATTTCTGACGAGGAGGAAGAACTTGAATTAACTAAATGGGAAGCCATAGTCTGGCTTGCTATTTTGACTGCATGGGTATCTGTATTGTCTGGATACCTTGTAGATGCCATAGAGGGAGCATCTGAGTCATTGAATATGTCAATGGCCTTTATTAGTGTCATCTTGCTTCCAATTGTGGGAAATGCTGCTGAGCATGCAAGCGCTATTATGTTTGCCATGAAGGACAAGCTTGATATCACAATTGGAGTTGCTGTTGGATCATCTACACAGATAGCTATGTTTGTGATCCCCTTCTGTGTGGTTGTTGGATGGTGCATGGGAAAAGAAATGGACTTGAATTTTCAACTCTTTGAGACTGCCACACTTTTTATCACTGTGCTGGTAGTTGCATTTATGATGCAGGAAGGAACGTCAAATTATTTCAAAGGCTTGATGCTTATTCTGTGCTATCTTATAGTTGCTGCCAGTTTTTTTGTACATGTAGACCCTCAAAATGATGATGACTAA 1233 0.4047 MEVVESAPFNNSSSAFDLESSHTSPLHLPKSFQIRTVYLVLIKPKINVLLPFGPLAILLHYLTPKHHGWVFFFSLIGIAPLAERLGYATEQLAFYTGPTVGGLLNATFGNATEMIISIYALKNDMIRVVQQSLLGSILSNMLLVLGCAFFTGGIIHHKKVQVFNKAAAVVNSGLLLMAVMGLLFPAVLHFTHSELHFGKSVLSLSRFSSCIMLLAYASYLFFQLRTQQNLYTPVHEVADNSEISDEEEELELTKWEAIVWLAILTAWVSVLSGYLVDAIEGASESLNMSMAFISVILLPIVGNAAEHASAIMFAMKDKLDITIGVAVGSSTQIAMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLILCYLIVAASFFVHVDPQNDDD* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0005 410 Gene3D - 247 401 IPR044880 -
Lan3g0005 410 Gene3D - 98 246 IPR044880 -
Lan3g0005 410 PANTHER VACUOLAR CATION/PROTON EXCHANGER 32 408 - -
Lan3g0005 410 TIGRFAM cax: calcium/proton exchanger 49 400 IPR004798 GO:0006816|GO:0015369
Lan3g0005 410 TIGRFAM caca2: calcium/proton exchanger 40 400 - -
Lan3g0005 410 MobiDBLite consensus disorder prediction 1 22 - -
Lan3g0005 410 Pfam Sodium/calcium exchanger protein 258 397 IPR004837 GO:0016021|GO:0055085
Lan3g0005 410 Pfam Sodium/calcium exchanger protein 69 224 IPR004837 GO:0016021|GO:0055085
Lan3g0005 410 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 32 408 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0005 Lan-Chr3 112034 131097 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0005 29 409 Antiporters AT1G55730 73.822 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0005 K07300 - gmx:100806000 653.669