Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0004 ATGGCAGCAGAAAGTGTAGAAGAAGAGAATAAGCTTACACTGTATTCATATTGGAGGAGTTCATGTTCCTTTCGACTCCGTATTGCTCTCAATCTCAAATCCATCAGCTATGATTACAAATCTGTCAATCTTCTGAAAGGAGAACAATCTCACCCTGAGTTTCTGAAGCTTAACCCTGTTGGATTTGTTCCTGTGTTAGTGGATGGCCCTGTTGTACTTACTGACTCCTTTGCCATCATCATGTATTTAGAAGATAAGTATCCTCACCGCCATCCGTTGCTGCCTAATGATATTCTTAAAAGAGCTATCAATTTTCAGGCTGCCAACATTGTTTCCTCATTAATACAACCTCTCCAAAACTTAAGTGTCCTGAACTACATTGCGGAAAAAGTTGGCCCTGATGAAAAGCTTCCTTGGGCCCAAACTGTTATTAGAAAAGGATTCACAGCACTCGAAAAGTTATTGAAAGACCACACAGGAAGATATGCGACTGGAGATGAAGTTTTCCTGGCAGATGTGTTTTTAGCGCCTCAGTTATATTCAGCATTCACGAGATTCAAGATTCACACGGATGAGTTTCCGATTCTATCAAGATTATATGCGACATATAATGATATCCCAGCATTCCGAGAGGCCTTGCCAGAGAACCAACCAGATGCAGTACACTAG 669 0.4111 MAAESVEEENKLTLYSYWRSSCSFRLRIALNLKSISYDYKSVNLLKGEQSHPEFLKLNPVGFVPVLVDGPVVLTDSFAIIMYLEDKYPHRHPLLPNDILKRAINFQAANIVSSLIQPLQNLSVLNYIAEKVGPDEKLPWAQTVIRKGFTALEKLLKDHTGRYATGDEVFLADVFLAPQLYSAFTRFKIHTDEFPILSRLYATYNDIPAFREALPENQPDAVH* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0004 222 PANTHER MALEYLACETOACETATE ISOMERASE 9 222 - -
Lan3g0004 222 TIGRFAM maiA: maleylacetoacetate isomerase 13 220 IPR005955 GO:0003824|GO:0005737|GO:0009072
Lan3g0004 222 CDD GST_C_Zeta 100 217 IPR034330 -
Lan3g0004 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 97 222 IPR010987 -
Lan3g0004 222 Gene3D Glutaredoxin 14 89 - -
Lan3g0004 222 CDD GST_N_Zeta 12 84 IPR034333 -
Lan3g0004 222 SFLD Glutathione Transferase (cytosolic) 12 202 IPR040079 -
Lan3g0004 222 SUPERFAMILY Thioredoxin-like 10 95 IPR036249 -
Lan3g0004 222 Pfam Glutathione S-transferase, C-terminal domain 140 186 - -
Lan3g0004 222 SFLD Main (cytGST) 12 202 - -
Lan3g0004 222 Pfam Glutathione S-transferase, N-terminal domain 11 84 IPR004045 -
Lan3g0004 222 SUPERFAMILY GST C-terminal domain-like 92 220 IPR036282 -
Lan3g0004 222 Gene3D - 94 222 - -
Lan3g0004 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 91 IPR004045 -
Lan3g0004 222 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 9 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0004 Lan-Chr3 75602 80292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0004 9 219 Glutathione S-transferase Gene Family AT2G02380 59.716 1.69e-91 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0004 K01800 - gmx:547590 354.755