Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0002 ATGGCGAGGATTAAGGTTTACGAACTTAGGAGCAAGACAAAGGCGGAGCTGCTGAACCAGCTGAAGGATCTGAAGGCTGAGCTCGCTCTTCTCCGGGTCGCTAAGGTCACCGGTGGTGCCCCTAATAAACTCTCCAAAATCAAGGTGGTAAGGCTGAACATTGCGCAAGTGTTGACAGTGATTTCACAGAAGCAGAAAGCGGCTCTCAGAGAGGCTTATAAGAATAAGAAGTATTTGCCTCTTGATCTTCGTCCCAAAAAAACACGTGCTATTCGTAGACGCCTCACCAAACACCAGGCATCATTGAAGACGGAACGGGAGAAAAAGAAGGAATTGTACTTTCCAATAAGGAAGTATGCAATCAAAGTTTAG 372 0.4624 MARIKVYELRSKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLNIAQVLTVISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPIRKYAIKV* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0002 123 Hamap 50S ribosomal protein L29 [rpmC]. 4 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Lan3g0002 123 Gene3D - 1 77 IPR036049 GO:0003735|GO:0005840|GO:0006412
Lan3g0002 123 PANTHER 60S RIBOSOMAL PROTEIN L35 1 123 IPR045059 GO:0000463|GO:0022625
Lan3g0002 123 Gene3D - 78 123 - -
Lan3g0002 123 TIGRFAM L29: ribosomal protein uL29 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Lan3g0002 123 PANTHER 60S RIBOSOMAL PROTEIN L35-LIKE 1 123 - -
Lan3g0002 123 CDD Ribosomal_L29_HIP 8 64 - -
Lan3g0002 123 Coils Coil 7 34 - -
Lan3g0002 123 Pfam Ribosomal L29 protein 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Lan3g0002 123 SUPERFAMILY Ribosomal protein L29 (L29p) 4 65 IPR036049 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0002 Lan-Chr3 55277 58635 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0002 1 123 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 89.431 1.43e-73 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0002 K02918 - gmx:100305671 229.18