Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1421 ATGGGTTGTTGCCAATCATCAGTGAGAGAGAAAAGTGAAGAAAAAGAAGGAAATCAACAACAACAGCAACAACAACAACCCTATCATCTCACTTCTTCAATCTCTCAACCACCAATTCCACACACAGATTCATCTTCAACTCCTCCTCCTATTCCTCCTCTTGGCTTTGATGGTTTTGATGGTTTCTCAGAGTTCTCCTTATCTGACCTTAAAGCAGCTACGAACAATTTCAGTTCAGAATTGATAGTATCAGAGAGTGGAGAGAAAGCACCTAACCTTGTATACAAAGGAAGATTAGTGAGTAACCGTGAGTGGATAGCAGTGAAGAAGTTCAGCAAAGGAGCATGGCCAGATCCAAAACAATTCGTTGAAGAAGCATCAGGTGTTGCTAAATTACGCCATCCAAGGCTTGCTAATTTGATTGGTTACTGTTGTGATGGTGATCATAGACTTCTTGTTGCTCAGTTTATGCCTAATGACACTCTCGCTAAACATCTCTTTCATTGGGAACATCAAACCCTTGAATGGGCAATGCGATTGAGAGTAGCTCTCTATATTGCTCAAGCTTTGAATTATTGCACTTCTCAAGGAAGACCTTTATACCATGATTTGAATGCTTATCGTGTTCTCTTTGATCAACAAGGTGATCCTCGTCTCTCTTGCTTTGGTTTAATGAAGAATAGCAGGGATGGAAGGGTCACCCCTGAAAGTGTCATTTACAGCTTTGGCACAGTTCTACTAGACCTCCTAAGCGGCAAGCACATCCCTCCGAGCCATGCACTTGATATGATACAGGGAAAAAACAACATGCTGCTAATGGAGTCACATTTAGAGGGGAAGTTTTCTACGGAAGAGGCAACTGTAGTTGTTAATCTTGCCTCTAAGTGTTTGCAATATGAACCTAGGGAGCGCCCTGATACAAAGGAGTTGGTCACAACACTTGCGCCATTGCATACAAAACCTGAAGTTCGTTCTCACATCATGCTTGGAATTCCAAAGCATGAGGAAGCTCCATCAATCCCACAACGTCCCCTTTCAGCAATGGGTGAGGCTTGTTCAAGAATGGACCTCACTGCAATACATCAGATCTTGGTTTCAACACATTACAGAGACGATGAAGGAACTAACGAGTTGTCATTCCAAGAGTGGACACAACAGATGAGAGATATGTTGGAGGCGAGGAAGCGTGGAGACTATGCATTCCGTGACAAGGATTTTAAGACAGCTATTGATAACTATTCCCAGTTTATCGATGTGGGAACTATGGTCTCCCCAACTGTTTTTGCAAGGCGCAGTCTCTGCTATCTGTTATGTGACCAACCAGATCCCGCACTTAGAGATGCAATGCAAGCGCAATGCGTTTATCCAGACTGGCCTACGGCTTTTTACATGCAATCAGTTGCGCTTGCAAAGCTGGACATGAACAAGGATGCAGCAGATATGTTAAATGAGGCAACCACATTGGAAGAGAAGAGGCAAAGAGGAGGCAGAGGATCATAG 1500 0.434 MGCCQSSVREKSEEKEGNQQQQQQQQPYHLTSSISQPPIPHTDSSSTPPPIPPLGFDGFDGFSEFSLSDLKAATNNFSSELIVSESGEKAPNLVYKGRLVSNREWIAVKKFSKGAWPDPKQFVEEASGVAKLRHPRLANLIGYCCDGDHRLLVAQFMPNDTLAKHLFHWEHQTLEWAMRLRVALYIAQALNYCTSQGRPLYHDLNAYRVLFDQQGDPRLSCFGLMKNSRDGRVTPESVIYSFGTVLLDLLSGKHIPPSHALDMIQGKNNMLLMESHLEGKFSTEEATVVVNLASKCLQYEPRERPDTKELVTTLAPLHTKPEVRSHIMLGIPKHEEAPSIPQRPLSAMGEACSRMDLTAIHQILVSTHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIDNYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMNKDAADMLNEATTLEEKRQRGGRGS* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1421 499 Gene3D Phosphorylase Kinase; domain 1 57 156 - -
Lan2g1421 499 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 498 IPR045845 GO:0004672|GO:0009742
Lan2g1421 499 Gene3D Tetratricopeptide repeat domain 388 496 IPR011990 GO:0005515
Lan2g1421 499 SUPERFAMILY TPR-like 391 492 IPR011990 GO:0005515
Lan2g1421 499 SUPERFAMILY Protein kinase-like (PK-like) 63 319 IPR011009 -
Lan2g1421 499 Coils Coil 471 491 - -
Lan2g1421 499 Pfam Protein kinase domain 94 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1421 499 PANTHER INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE 4 PROTEIN-RELATED 1 498 - -
Lan2g1421 499 MobiDBLite consensus disorder prediction 18 41 - -
Lan2g1421 499 Gene3D Transferase(Phosphotransferase) domain 1 158 331 - -
Lan2g1421 499 ProSiteProfiles Protein kinase domain profile. 80 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1421 499 MobiDBLite consensus disorder prediction 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1421 Lan-Chr2 24613253 24617129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1421 65 338 Glycoside Hydrolase AT3G07070 31.210 4.61e-39 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lan2g1421 Pkinase 8.4e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1421 K14500 - gmx:100808907 829.706