Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1393 ATGCATGCATCAGAGCATCATACAAGTTCAAGCATGTACCATGAACCATTGCAACAAATGGAGGCATATTGTTTGCCTCAGTATCAGACTCTAAATCATCAGCTATACGACAGTGGTGGAGGCCATGGAATCACCAACTTCTCAAATCCAATTTCTTCGGAACTTTACTGCACACTGGAGTCATCGTCCGGGACTGGAAGTTTCACTGTTTATAACTCCACCTCAGCTGTTAGTTTCACAGCTAATGGAAGCCCAATATCATGGCAAGATTCTCATTCATATCCACCTTACCAGCATCATAATAATCATTCCCCTGACAATACCTATATCTCTTCGATGAGTGGCTCATGCATAACCAATGATTTGAGTAGCATCAGACACAAGCTGAGAGAGCTTGAAAGTGTAATGCTTGGGCCTGACTCTGATAATATTGATGATAGTTATGACACTGCCTTCAATGATGGAGCTAACTTTGTATCTTCTGAGATGGAAATTTTGAGACAAACAATGGTGGGGATTTGTAGTAAAAACCTAAAGAATGTCCTCATTGGGTGTGCTAAAGCAGTAGCCGATTCTGATTTGCTAATGGCACAATGGCTGATGGATGAGTTAAGACAGTTGGTGGCAGTTTCTGGCGAACCCATTCAAAGGTTGGGTGCATACATGTTGGAAGGACTTGTTGCGAGAATGTATTCCTCTGGGAGTTCAATCTACAAATCCTTAAGATGCAAGGAACCAGAAAGTGCTGAGCTCCTCTCTTACATGCACATACTGCATGAAGTTTGCCCTTACTTCAAATTCGGCTACATGTCCGCGAATGGAGCCATTGCCGAAGCTATGAAACATGAGGACAGGGTTCATATAATTGATTTCCAAATTTCACAAGGATGCCAGTGGATTACTTTAATTCAGGCTTTTGCAGCTAGGCCTGGGGGCCCACCGCACATTCGAATCACAGGTATTGATGATTCAACATCGGCTTATGCACGTGGAGGTGGACTGCATATAGTTGGAAAGAGGTTATCCAAGCTTGCCGAGCATTTTAAGGTGCCATTTGAATTTCACGCTGCAGCTATGTCTGGTTGTGATGTTCAGCTGCACAAACTGGGCGTTAGACCGGGCGAGGCGCTGGCCGTAAATTTTGCATTCATGCTGCATCACATGCCTGATGAAAGTGTGAGTATTCAGAATCACAGGGACATGCTGCTGAGATTGGTGAAGAGCCTGTCTCCAAAGGTGGTGACACTTGTTGAGCAAGAGTCTAACACAAACACTGCTGCGTTCTTTCCGCGTTTCCTCGAAACACTAGACTATTACACAGCTATGTTTGATTCAATAGATGTGACTCTTCCCAGAGAGCATAAGGAGAGAATCAATGTTGAGCAGCATTGCTTGGCAAGGGACCTGGTTAACATCATAGCTTGTGAAGGGGTTGAGAGGGTGGAAAGACATGAGGTGCTTGGGAAGTGGAGGTCAAGATTTGCAATGGCTGGTTTCACTCCTTACCCTTTGAGCTCATTGGTAAATTGTACTATTAAGAAACTGCTTGATAACTATAGTGATAGATATAGACTTGAAGAGAGAGATGGAGCTTTATATTTGGGTTGGATGAATAGAGACTTGGTTACTTCTTCTGCATGGAAATGA 1647 0.4359 MHASEHHTSSSMYHEPLQQMEAYCLPQYQTLNHQLYDSGGGHGITNFSNPISSELYCTLESSSGTGSFTVYNSTSAVSFTANGSPISWQDSHSYPPYQHHNNHSPDNTYISSMSGSCITNDLSSIRHKLRELESVMLGPDSDNIDDSYDTAFNDGANFVSSEMEILRQTMVGICSKNLKNVLIGCAKAVADSDLLMAQWLMDELRQLVAVSGEPIQRLGAYMLEGLVARMYSSGSSIYKSLRCKEPESAELLSYMHILHEVCPYFKFGYMSANGAIAEAMKHEDRVHIIDFQISQGCQWITLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLHIVGKRLSKLAEHFKVPFEFHAAAMSGCDVQLHKLGVRPGEALAVNFAFMLHHMPDESVSIQNHRDMLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLDYYTAMFDSIDVTLPREHKERINVEQHCLARDLVNIIACEGVERVERHEVLGKWRSRFAMAGFTPYPLSSLVNCTIKKLLDNYSDRYRLEERDGALYLGWMNRDLVTSSAWK* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1393 548 ProSiteProfiles GRAS family profile. 169 548 IPR005202 -
Lan2g1393 548 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 15 548 - -
Lan2g1393 548 Pfam GRAS domain family 178 548 IPR005202 -
Lan2g1393 548 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 548 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1393 Lan-Chr2 24501099 24504003 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1393 95 548 GRAS Transcription Factor Family AT5G48150 70.588 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan2g1393 GRAS 2.4e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1393 - - gmx:100808300 920.613