Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1387 ATGGCCATTTCTGCTATCCAGCAATCAGCCTTTACTGCCAAGGCTGCTTTGAAGGGAAATGAGCTTGTTAGGAAGATTGGTGGCTTTGGCAAAGGTCGCATTACTATGCGTAGAACAGTTAAGAGTGCTCCTCAGAGCATCTGGTATGGTCCTGACCGTCCCAAGTACTTGGGACCCTTCTCAGAACAAATTCCATCATACTTGACTGGTGAATTCCCTGGTGACTATGGATGGGACACAGCTGGATTATCAGCTGACCCTGAAACCTTCGCCAAGAACCGTGAGCTTGAGGTGATTCACAGCAGATGGGCCATGCTTGGTGCACTAGGAATTATCTTCCCAGAGATCCTTGAAAAGAATGGTGTCAAATTCGGTGAAGCGGTGTGGTTCAAGGCTGGTGCTCAGATCTTCTCCGAGGGTGGCCTTGACTACTTAGGCAACCCGAACCTGATTCATGCTCAGAGCATTCTTGCAATCTGGGCTGTTCAGGTTGTGCTCATGGGATTAATTGAAGGCTACAGGGTTGGTGGAGGACCACTTGGAGAAGGATTAGACCCACTATACCCTGGTGGTGCCTTTGATCCACTTGGTCTGGCTGATGATCCTGAGGCATTTGCAGAGTTGAAGGTGAAAGAAATCAAGAACGGCAGATTGGCAATGACCTCCGTCTTTGGTTTCTTTGTTCAAGCCATTGTTACTGGCAAGGGCCCTATTCAGAACCTTTATGACCATGTTGCTGATCCTGTTGCCAACAATGCATGGGCTTTTGCCACTAACTTTGTCCCTGGACAATGA 795 0.4843 MAISAIQQSAFTAKAALKGNELVRKIGGFGKGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGIIFPEILEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMTSVFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPGQ* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1387 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Lan2g1387 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
Lan2g1387 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Lan2g1387 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2.1, CHLOROPLASTIC-RELATED 1 264 - -
Lan2g1387 264 Pfam Chlorophyll A-B binding protein 65 230 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1387 Lan-Chr2 24458211 24459624 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1387 1 264 Chloroplast and Mitochondria Gene Families AT2G05070 85.283 8.29e-172 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1387 K08913 - gmx:100815789 492.271