Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1354 ATGATGATGAGGTTGTTATCTTATAGAGTTGTACTAGTGTTGTGTGTTTTGGTTTTCATGATGTGGGCTCAGGTGGATTTAGCAGAAGGTGGTGCTAGGAACTATATTAGTTGGGAAGATTTGCAAGTTGATGAACAAAGGTTGGCATTGAAGTCTCATAATGAGGTTAGAGTTATTGTGGTTGATCAGCATGGAAAGGGACATTCAAAAACTGTTCAAGGAGCAGTGGATATGGTTCCAAATCACAACACTCAAAGGGTGAAAATATACATTTATCCAGGAGTTTACAGAGAGAAGGTGCTTGTGCCAAACAACAAGCCTTATATTTCATTTATAGGTAGAAGAAATGAAACATCAGGTGCTGCTATTACTTGGAATAGTAAATCATCTGATAAAGGACCAAATGGAGAAACATTGGGCACATATGGTTCAGCAACTGTAGGAGTAGAATCAGATTATTTCTGTGCAACTCAGATCACTTTTGAGAACTCGGTCGTTGCAGCACCAGGTGGAGTTGGAATGCAAGCCGTCGCACTGAGGGTAAACAGTAATAGAGCCATGTTCTATAGAGTTCAGATCAAGGGAACACAAGACACTCTCTTAGATAACTCAGGAACACATTACTTCTTAAAGTGTCTCATCCAAGGGAAAGTTGATTTTATCTTTGGCAGTGCAAAATCATTCTATGAGAAATGTCGTCTTCAGTCCATAGCTGAAAACTACGGAGCGATCGCTGCACATCACCGGGATTCACCTGTTCAAGATACCGGATTTTCTTTTGTAGGATGTAGGATTAGAGGAACTGGCAAGGTGTACCTTGGTAGAGCATGGGGTAACTACTCAAGAATAATATATTCTAATACTTATATGGATGATATTATCAATCCTACAGGGTGGTCAGAATGGAATCATCCAGAAAGAAGGAGGACTGCAGTGTTTGGTGAGTATCAATGCCATGGAAAAGGAGCAGATAGAAGACATAGGGTGCCTTGGTCAAAATCATTCACCTACAATGAAGCAAAACCTTTTCTGGACAAGAGATTCATAAATGGAGATCAATGGCTTAGACTATAG 1074 0.4004 MMMRLLSYRVVLVLCVLVFMMWAQVDLAEGGARNYISWEDLQVDEQRLALKSHNEVRVIVVDQHGKGHSKTVQGAVDMVPNHNTQRVKIYIYPGVYREKVLVPNNKPYISFIGRRNETSGAAITWNSKSSDKGPNGETLGTYGSATVGVESDYFCATQITFENSVVAAPGGVGMQAVALRVNSNRAMFYRVQIKGTQDTLLDNSGTHYFLKCLIQGKVDFIFGSAKSFYEKCRLQSIAENYGAIAAHHRDSPVQDTGFSFVGCRIRGTGKVYLGRAWGNYSRIIYSNTYMDDIINPTGWSEWNHPERRRTAVFGEYQCHGKGADRRHRVPWSKSFTYNEAKPFLDKRFINGDQWLRL* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1354 357 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 13 357 - -
Lan2g1354 357 PANTHER PECTINESTERASE QRT1 13 357 - -
Lan2g1354 357 Pfam Pectinesterase 59 352 IPR000070 GO:0030599|GO:0042545
Lan2g1354 357 Gene3D - 57 357 IPR012334 -
Lan2g1354 357 SUPERFAMILY Pectin lyase-like 58 355 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1354 Lan-Chr2 24249034 24251005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1354 11 309 Carbohydrate Esterase AT5G55590 55.108 2.24e-126 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1354 K01051 - gmx:100804220 551.592