Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1349 ATGGCAGTTACTACTACTCTCTTTTCTCTATATCCTCTTTTCAATTCTGAACGTAAAAGAAGAGAATCAACACATAAGAATGTTGTTCTTGTTGTTGCAGCTTCACATTCCAATCCCAGAATTCTCAAAACTAACAGAAAGTCTAAGTATGGCGATTTTCTCTCTCCCTATGATGACGATGATGATGATTTTGATGATGATGATGATGATTTTGATGATGACGAATTTGCTGAGCCTGCTCGATTTGATGTCAATGACAAGAGATCCAAGCTACATGCAATTAAAGGAAAAGATAGAGAACAAAAGAAAGAGTGGGGTGTAAAATCTTTTCATAATGGACAAAGCACAAAAATGCCCAGAAGTGAGAGAGTGGCTTCCTTACAAGCGAATAGCAGCGGAAAGTTTGTTGGAAATTTGAAGGATAAAAAATATCCACGGTTGTCAGAAGAGATTATTTTGGATGTGAGATGGTTACCACTTCTCGATTACTTAAGCACCTTTGGAATTAAGGAATCACACTTTCTCCAAATGTATGAGAGGCACATGTCATCATTTCAAATGACTGTATGTGTTGCACAGGAAAGATTAGAATACTTAATGAGTGTTGGTGTCAAACATAGAGATATAAGAAAAATCCTTCTGAGACAGCCACAAATTCTGGAGTATACGCTGGAAAACAATTTGAAGTCCCATGTTGCTTTCTTGACGGGCTTGGGTATACCTAATTCCAGAATAGGGCAAATCATTGCTGCTGTACCGTCCTTATTTTCGTACAGTGTTGAAAATTCGTTAAAACCAACAGTAAGATATTTAGTTGAGGAAGTTGGCATCAATGAAAAAGATTTGGGTAAAGTAATCCAGCTGAGCCCTCAAATTCTTGTCCAGCGTATCGACATTTCATGGAATACTCGATACATGTTTCTTTCCAAAGAGTTGGGAGCTCCTAAAGATAGCATAGTAAAAATGGTGAAAAAACATCCTCAGCTTCTCCATTACAGCATAGATGATGGATTATTGCCAAGGATAAATTTTCTAAGGAGCATAGGAATGAAAAATGCAGACATTTTGAAAGTCTTGACTAGCCTTACACAGGTGCTATCTTTGTCCCTGGAGGAGAATCTAAAGCCCAAGTATTTGTACTTGGTAAATGAACTTCACAATGAGGTGCATTCATTGACCAAATACCCAACTTACCTTAGCTTGTCTTTGGACCAGAGAATTCGCCCTCGTCATAGGTTCTTGGTTTCCCTAAAGAAAGCTCCAAAAGGACCATTTCCACTTGGATCTCTAGTTCCAACTGATGAATCCTTTTGTCAGAATTGGGCTAAAACCAGTTTGGATACATATTTGGCATTTCGTCAGAGATTATTGCTTAAAAAGTTTGCTGAGAAATATGAAAGAAAAATGTGA 1410 0.3766 MAVTTTLFSLYPLFNSERKRRESTHKNVVLVVAASHSNPRILKTNRKSKYGDFLSPYDDDDDDFDDDDDDFDDDEFAEPARFDVNDKRSKLHAIKGKDREQKKEWGVKSFHNGQSTKMPRSERVASLQANSSGKFVGNLKDKKYPRLSEEIILDVRWLPLLDYLSTFGIKESHFLQMYERHMSSFQMTVCVAQERLEYLMSVGVKHRDIRKILLRQPQILEYTLENNLKSHVAFLTGLGIPNSRIGQIIAAVPSLFSYSVENSLKPTVRYLVEEVGINEKDLGKVIQLSPQILVQRIDISWNTRYMFLSKELGAPKDSIVKMVKKHPQLLHYSIDDGLLPRINFLRSIGMKNADILKVLTSLTQVLSLSLEENLKPKYLYLVNELHNEVHSLTKYPTYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLGSLVPTDESFCQNWAKTSLDTYLAFRQRLLLKKFAEKYERKM* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1349 469 MobiDBLite consensus disorder prediction 95 120 - -
Lan2g1349 469 SMART mt_12 356 388 IPR003690 GO:0003690|GO:0006355
Lan2g1349 469 SMART mt_12 320 351 IPR003690 GO:0003690|GO:0006355
Lan2g1349 469 SMART mt_12 389 420 IPR003690 GO:0003690|GO:0006355
Lan2g1349 469 SMART mt_12 283 315 IPR003690 GO:0003690|GO:0006355
Lan2g1349 469 SMART mt_12 246 278 IPR003690 GO:0003690|GO:0006355
Lan2g1349 469 SMART mt_12 210 241 IPR003690 GO:0003690|GO:0006355
Lan2g1349 469 Gene3D Transcription termination factor 3, mitochondrial 219 456 IPR038538 -
Lan2g1349 469 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF9, CHLOROPLASTIC 23 461 - -
Lan2g1349 469 PANTHER CGI-12 PROTEIN-RELATED 23 461 IPR003690 GO:0003690|GO:0006355
Lan2g1349 469 Pfam mTERF 196 280 IPR003690 GO:0003690|GO:0006355
Lan2g1349 469 Pfam mTERF 162 235 IPR003690 GO:0003690|GO:0006355
Lan2g1349 469 Pfam mTERF 225 417 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lan2g1349 mTERF 2.7e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1349 K15032 - gmx:102660933 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1349 2 24219191 24222292 Lan2g1349 2 24219191 24222292 ECH