Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1346 ATGGACGCTTCTACCACCAATGAAAGCAACTCAGTTTCGGACCCAAATGACCCGAATAAAAAATTCGGGTCGGGTCAGAATAATTCAGCTAGGTATAAGCTTATGTCGCCGGCGAAACTTCCGATCTCGAGGTCTCCCTGCATCACCATACCTCCGGGACTTAGTCCATCGTCATTTTTGGAGTCCCCGGTTCTTCTTTCCAACATGAAGGTGGAGCCTTCACCTACTACAGGGTCCTTTTCTAAGCTTCATCAAACAGTACATGGTTCCATGCCTTCTGCTATGGCTGCTACATTTCCTGTAACCACTACATGCCTCAATTCCAATACTGTTGAGGAAAGAAAATCAAACATCTTTGAGTTTAAACCAAACATGGTTCCTGTGGACTTCAACAACCACGTAAGTGAACAATATACTCAAGCGAAAGGTCCAGGAAAAGCTCAATCATTTGCCTCCTCGCCATTAGTTGAAGGTGACATAGCTGTTCCTTCTAATGAATTAAGCCTTTCATCACCTGTTCAAATGGTTAGTTCTGGGGCTAGTACTCCTGTTGAAGTCGATTCGGAGGAATTGAACCACAAAGGCAACACAGCAACTGCGCTTCAAGCATCACAAGTTGAGGAGGTTAAAGGCAGTGGACCTTCAGTTGCACCTGAGAGAGCATCTGATGATGGATACAACTGGCGAAAATATGGACAGAAACTTGTTAAAGGAAGTGAGTTTCCACGCAGTTATTACAAATGTACACATCCTAACTGTGAAGTGAAGAAACTTTTTGAACGCTCTCATGATGGTCAAATCACTGAGATTGTTTACAAAGGAACACATGATCATCCGAAGCCTCAACCCAGCCGACGATACTCTTCTAGCACTATTGTGTCTATGCAAGAAGAGAGATCTGCTGATCCCAACAGCACTCCAGACCTATCGGCTGTGGCAACAAATGATTGTCAAGAGGGTGCTGCGCTTGTGTCGAACAGGACTAATGAGGAAATTGATGACGATGATCCCTTCTCGAAGCGTAGAAAAATGGAACTTGGAATTGCTGACGTAACTCCTATAGTTAAGCCTATCCGGGAACCACGGGTTGTTGTACAAACTCTGAGCGAGGTTGATATATTGGATGATGGGTATCGCTGGCGCAAGTATGGGCAAAAGGTGGTGAGAGGCAATCCTAACCCTAGGAGTTACTACAAGTGCACAAATGCTGGTTGCCCCGTCAGAAAACACGTGGAGAGAGCATCTCATGATCCGAAAGCCGTGATAACAACATACGAGGGTAAACACAATCATGACGTACCAGCTGCAAGAAGTAGTAGCCATGACATGGCAGGACCGGCACCAGCAGGAACACGAATCAAGTTGGAAGAGAGTGATACTATTAGCCTTGACCTCGGGATGGGAATAAGCTCAGCTGCTGAAAATAGATCAAATGGGCAAAGGAAAATGCTGCTCTCTGAATATGGCCAAAACCAAACTCAACAAACCAGCAATTCCAACTTCAAGTTTGTTCATACTAGTGCAGGTCCGGTATACTTCGGCGTACTAGATAACGGCGCGAATCCGTATGGTTCTAGAGGAAATAGGAACGATGATGCATCTTTAAACCATGCCTCATCATATCCATGCTCACAGAACATTGGAAGAGTACTAACTGGTCCATGA 1665 0.4511 MDASTTNESNSVSDPNDPNKKFGSGQNNSARYKLMSPAKLPISRSPCITIPPGLSPSSFLESPVLLSNMKVEPSPTTGSFSKLHQTVHGSMPSAMAATFPVTTTCLNSNTVEERKSNIFEFKPNMVPVDFNNHVSEQYTQAKGPGKAQSFASSPLVEGDIAVPSNELSLSSPVQMVSSGASTPVEVDSEELNHKGNTATALQASQVEEVKGSGPSVAPERASDDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIVYKGTHDHPKPQPSRRYSSSTIVSMQEERSADPNSTPDLSAVATNDCQEGAALVSNRTNEEIDDDDPFSKRRKMELGIADVTPIVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAARSSSHDMAGPAPAGTRIKLEESDTISLDLGMGISSAAENRSNGQRKMLLSEYGQNQTQQTSNSNFKFVHTSAGPVYFGVLDNGANPYGSRGNRNDDASLNHASSYPCSQNIGRVLTGP* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1346 554 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 25 533 - -
Lan2g1346 554 MobiDBLite consensus disorder prediction 284 307 - -
Lan2g1346 554 MobiDBLite consensus disorder prediction 272 307 - -
Lan2g1346 554 ProSiteProfiles WRKY domain profile. 369 434 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g1346 554 Gene3D WRKY domain 215 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan2g1346 554 Gene3D WRKY domain 359 435 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan2g1346 554 MobiDBLite consensus disorder prediction 1 33 - -
Lan2g1346 554 SMART WRKY_cls 374 433 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g1346 554 SMART WRKY_cls 222 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g1346 554 ProSiteProfiles WRKY domain profile. 217 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g1346 554 Pfam WRKY DNA -binding domain 375 431 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g1346 554 Pfam WRKY DNA -binding domain 223 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g1346 554 MobiDBLite consensus disorder prediction 1 36 - -
Lan2g1346 554 SUPERFAMILY WRKY DNA-binding domain 220 281 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan2g1346 554 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 25 533 IPR044810 GO:0003700
Lan2g1346 554 SUPERFAMILY WRKY DNA-binding domain 366 434 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1346 Lan-Chr2 24203334 24210658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1346 35 554 WRKY Transcription Factor Family AT4G26640 53.680 1.62e-174 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan2g1346 WRKY 1.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1346 - - lang:109360250 917.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1346 2 24203334 24210658 Lan2g1346 2 24203334 24210658 ECH
Lan6g1633 6 25139134 25146254 Lan2g1346 2 24203334 24210658 LSH
Lan2g1346 2 24203334 24210658 Lan11g0045 11 280972 285047 LSH
Lan6g1633 6 25139134 25146254 Lan2g1346 2 24203334 24210658 PCT
Lan2g1346 2 24203334 24210658 Lan2g1346 2 24203334 24210658 PCT
Lan2g1346 2 24203334 24210658 Lan11g0045 11 280972 285047 PCT
Lan2g1346 2 24203334 24210658 Lan6g1633 6 25139134 25146254 PCT
Lan11g0045 11 280972 285047 Lan2g1346 2 24203334 24210658 PCT