Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1339 ATGAAAAAGGGTATGGCGAATTCAGATGATAATGATGAACCTCAATCTTTGTGTTTATCAAATTATCACCTTGATGATGATAATGACACGCCTCTATCATTCATTGTGCTTCCAATTAAATGGAGTGAATCTGATGAAGATGATTCTGTTGAACAGAAGAAGGTGTTCATACATGGTTATGTTCACCCCAATAGGCTAAAGAAGATGTTTCCAGTTAAAGCTTGGAGCTTTAATCTTTCATCTTTGAAACCCATATTATCATTGCAAACAAAAGATGGAAACTGGATCAAACTTAAGAGCCCAAGGAAGAGTTTTGAGGCTACTATAAGGACCATTTTGATTACTATTCATTTCCTGCATTATGCTAAGAAATATCCTAAACTATCTTCATCTAGATCTGTTTGGGATAACTTGTCTAAAGTTAAGGAGTTGAGCTCTTATAAGCTAAAGCCTTCACTCAGTGATTTATTGAACCATATGCATTTGATTAGTGAAGTTGCCAAAAGAGATGATATCTTAGCTAAGTCCAAGCTCTTGCTCACAATTTTAGAGGAGAATCCAGGGAGTCAGAAACTTTCTGATGAGAAGGCTCGTGATATGATGGATGAAGCTAATGAAGAGTCAGAGCCAGAGGATGATGTTTGTGCATTGTGTGATAATGGTGGTAACCTTGTGTGTTGTGATGGAGCATGCAAGAGGTCATTTCATGCTACTGTGGAGCATGGTAGAGAATCTATGTGTGCTTCTCTTGGGCTTACCAAGAAGGAAGTTGATAAGAAGACCTTTTACTGCAGTAATTGTGAACACAAACAGCACCAATGCTTTGCATGTGGCAAGTTGGGATATTCTGGTGTAGCTAAGGGTGCTGAGGTTATTCAATGTGATTCTGCAACTTGTTACCATTTTTATCATCCGCATTGTGTTGCGAAGTTACTTCCTCAAGTAGTTAAGCATGATGTGGAGGGACTTGAGAGAAATATTGCTGATGGGAATCATTTTACATGTCCTGTTCATTATTGCTGTGTCTGTAAAGAAGGGGAAAATAAGAAGGATCCTGAGTTGCAATTTGCTGTTTGTAGGCGTTGTCCAAACTCATATCATCGCAAATGTTTGCCAAGAGAAATTTCTTTTGACAACGAAAATGATGAAGATATTATACCAAGGGCTTGGGAAGGTCTTTTATCAGACAATCGCATTCTTATATATTGCTTGGATCATGAGATTGATGATGAACTTGGGACTCCTATTAGAGATCATATTAAATTCCCCAATTTGAAAGTTATTGCTCGAGAAATTAATACTGCTAAGGAAAAGATGAAGCACCCAGCCATAGATAGAGTAATATCGAAGAAGAACAATGTTGACTTAGATAATTCATCTGACAAAAGCACCTCTAAAGTGACTGGAAAACTGTCTCCAGCGAAAGTTGGAAGCAAGAAGTCTGAAAATATTATTTCTAGTTCAGATATTTCAAGAAAACCAAAATCAAAAGAAACATCAAAAAGGTGCTCATTTGAGAATAAGAGATCAATCTCAGAGAAATATAAAATGCCTAACAATGAGGAAGACCAGCCCTTATGTGCTCTCATAAATAAGGATTTTATGGGCATTAAGCCTGACATTCAGGGGCCTCTATTAGATGCTGATTCAGAGAGGAGATTGTTGGCTTTGGTGGAAGAAGTTAAATCAGAAGTTACATTGGACAGTGTTAAGAAACAATTTGCTTCTGATTATACTCCCTACTCGTTGAGAAAAGCGGAGAAGGCCATTGTAAATGGGAAGCTGGAGGGAGGATGCAAAATTCAGGATGTACAACCTGTTTGCAACCCTGATGGCTTACTAAAGATTGTTGATAGACTACATTGGTATGCTCAGAACGGTGATACCATTGTGGATTTTTGTTGTGGAGTTAATGATTTTAGCATCCTTATGAAGAAAAAGCTTGAAGAGAGTGGGAAGAAATGCTCATACAAAAGCTATGATATACTTCCAACAAAGAATAATTTTAGTTTTGAAAGGAGAGATTGGATGACTGTCCGTCCAAATGAACTACCTACGGGATCACAATTGATCATGTGCCTCAGCCTCTGCTTTGGAACTAAAACAGCTTTGGCTAACAACTTTTTAGATAAGGCGCTCGAGTTTGAACCAAAGCTCCTACTTCTTATAGTACCACAAGAAGCAGAGAGGCTTGATAAAAAACTGTCATCGTATGATCTCGTCTGGGAGGACAAGAATTTTCAGTCAGGCTTGTCTTTTTATGTAACCGGATCAGTTGATGTAAATGACAAACAAGTCGGGCAGTGGAATGCAAAGCCCCATGTACTCTCTTTTTGGAGCCGTCGTGACTGGACTACTAAACACAAGGTCATAGCCCAGGAGCACGGTCACGTCTCCTACTCGCATGAAGTATTAGAGATGGATACTGAGAACCACATGCTGAGTTATGATCTTCTGCAGTCAACTGATGATAAAGAAGATCAAGCATCAATGGATGAAGGTAAGAAAAGCAGCGCACGTCATGGTAATGTTGACCAAGAGAGTAAAAAGGAACCAAAATGTATGAAGAGTAAGTCTGGCAAGACGTCACGGAAGAGGAAGCATATTGAGGAAGATTATAGCTTACCAGCCAAAAGGCAAGCTGTAAATGGAATGACTGGAGAAGTACCTAACCGTATTCAACCCAATCCAAATAATAGGAGTTCCTCAGCTGAAGGTTCTGAGCCCGAACCTGTTATCACCTGTCCAAATGTTGAGGTTAGTGATAATACTAGGATCAAAGAAGGGTCAAGTGTTGTGAGTGCCCTTTCTGGTTCTAGTGGTACAAGTAAAGGGGAACACGGCGGCAAGGGTGAGGAAGAAAAGCAACAGATAGAGTCAGATGAAACGGAACCTAGTTCAGCAACCAAGCGATCTTATAAGTTGAACCATGTCCGGATGATGGGTTCGGAAACTCCTACAGTTATTAGAAGTTGCACCTGTCAAGGCAGTGTGCCCGAACCTGGATATGTTGCTAGGCAGCTGAGCTTTGCATCTGGTCCCAACCTTGAATATTCGCTGCGGCATTCAGTTGGTTGGCTTGATGAGTAG 3090 0.399 MKKGMANSDDNDEPQSLCLSNYHLDDDNDTPLSFIVLPIKWSESDEDDSVEQKKVFIHGYVHPNRLKKMFPVKAWSFNLSSLKPILSLQTKDGNWIKLKSPRKSFEATIRTILITIHFLHYAKKYPKLSSSRSVWDNLSKVKELSSYKLKPSLSDLLNHMHLISEVAKRDDILAKSKLLLTILEENPGSQKLSDEKARDMMDEANEESEPEDDVCALCDNGGNLVCCDGACKRSFHATVEHGRESMCASLGLTKKEVDKKTFYCSNCEHKQHQCFACGKLGYSGVAKGAEVIQCDSATCYHFYHPHCVAKLLPQVVKHDVEGLERNIADGNHFTCPVHYCCVCKEGENKKDPELQFAVCRRCPNSYHRKCLPREISFDNENDEDIIPRAWEGLLSDNRILIYCLDHEIDDELGTPIRDHIKFPNLKVIAREINTAKEKMKHPAIDRVISKKNNVDLDNSSDKSTSKVTGKLSPAKVGSKKSENIISSSDISRKPKSKETSKRCSFENKRSISEKYKMPNNEEDQPLCALINKDFMGIKPDIQGPLLDADSERRLLALVEEVKSEVTLDSVKKQFASDYTPYSLRKAEKAIVNGKLEGGCKIQDVQPVCNPDGLLKIVDRLHWYAQNGDTIVDFCCGVNDFSILMKKKLEESGKKCSYKSYDILPTKNNFSFERRDWMTVRPNELPTGSQLIMCLSLCFGTKTALANNFLDKALEFEPKLLLLIVPQEAERLDKKLSSYDLVWEDKNFQSGLSFYVTGSVDVNDKQVGQWNAKPHVLSFWSRRDWTTKHKVIAQEHGHVSYSHEVLEMDTENHMLSYDLLQSTDDKEDQASMDEGKKSSARHGNVDQESKKEPKCMKSKSGKTSRKRKHIEEDYSLPAKRQAVNGMTGEVPNRIQPNPNNRSSSAEGSEPEPVITCPNVEVSDNTRIKEGSSVVSALSGSSGTSKGEHGGKGEEEKQQIESDETEPSSATKRSYKLNHVRMMGSETPTVIRSCTCQGSVPEPGYVARQLSFASGPNLEYSLRHSVGWLDE* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1339 1029 MobiDBLite consensus disorder prediction 454 507 - -
Lan2g1339 1029 MobiDBLite consensus disorder prediction 823 875 - -
Lan2g1339 1029 SUPERFAMILY FYVE/PHD zinc finger 202 271 IPR011011 -
Lan2g1339 1029 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 205 270 IPR013083 -
Lan2g1339 1029 MobiDBLite consensus disorder prediction 887 908 - -
Lan2g1339 1029 PANTHER ENHANCED DOWNY MILDEW PROTEIN 613 957 - -
Lan2g1339 1029 PANTHER ENHANCED DOWNY MILDEW PROTEIN 5 600 - -
Lan2g1339 1029 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 5 600 - -
Lan2g1339 1029 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 613 957 - -
Lan2g1339 1029 MobiDBLite consensus disorder prediction 823 972 - -
Lan2g1339 1029 Coils Coil 1027 1029 - -
Lan2g1339 1029 MobiDBLite consensus disorder prediction 917 944 - -
Lan2g1339 1029 SMART PHD_3 214 268 IPR001965 -
Lan2g1339 1029 SMART PHD_3 273 339 IPR001965 -
Lan2g1339 1029 SMART PHD_3 340 407 IPR001965 -
Lan2g1339 1029 MobiDBLite consensus disorder prediction 946 968 - -
Lan2g1339 1029 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 271 390 IPR013083 -
Lan2g1339 1029 CDD PHD2_NSD 273 338 - -
Lan2g1339 1029 MobiDBLite consensus disorder prediction 491 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1339 Lan-Chr2 24133997 24141329 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1339 203 315 PHD Transcription Factor Family AT3G14980 28.571 4.80e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1339 - - lang:109342095 2042.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1339 2 24133997 24141329 Lan2g1339 2 24133997 24141329 ECH