Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan2g1339 | ATGAAAAAGGGTATGGCGAATTCAGATGATAATGATGAACCTCAATCTTTGTGTTTATCAAATTATCACCTTGATGATGATAATGACACGCCTCTATCATTCATTGTGCTTCCAATTAAATGGAGTGAATCTGATGAAGATGATTCTGTTGAACAGAAGAAGGTGTTCATACATGGTTATGTTCACCCCAATAGGCTAAAGAAGATGTTTCCAGTTAAAGCTTGGAGCTTTAATCTTTCATCTTTGAAACCCATATTATCATTGCAAACAAAAGATGGAAACTGGATCAAACTTAAGAGCCCAAGGAAGAGTTTTGAGGCTACTATAAGGACCATTTTGATTACTATTCATTTCCTGCATTATGCTAAGAAATATCCTAAACTATCTTCATCTAGATCTGTTTGGGATAACTTGTCTAAAGTTAAGGAGTTGAGCTCTTATAAGCTAAAGCCTTCACTCAGTGATTTATTGAACCATATGCATTTGATTAGTGAAGTTGCCAAAAGAGATGATATCTTAGCTAAGTCCAAGCTCTTGCTCACAATTTTAGAGGAGAATCCAGGGAGTCAGAAACTTTCTGATGAGAAGGCTCGTGATATGATGGATGAAGCTAATGAAGAGTCAGAGCCAGAGGATGATGTTTGTGCATTGTGTGATAATGGTGGTAACCTTGTGTGTTGTGATGGAGCATGCAAGAGGTCATTTCATGCTACTGTGGAGCATGGTAGAGAATCTATGTGTGCTTCTCTTGGGCTTACCAAGAAGGAAGTTGATAAGAAGACCTTTTACTGCAGTAATTGTGAACACAAACAGCACCAATGCTTTGCATGTGGCAAGTTGGGATATTCTGGTGTAGCTAAGGGTGCTGAGGTTATTCAATGTGATTCTGCAACTTGTTACCATTTTTATCATCCGCATTGTGTTGCGAAGTTACTTCCTCAAGTAGTTAAGCATGATGTGGAGGGACTTGAGAGAAATATTGCTGATGGGAATCATTTTACATGTCCTGTTCATTATTGCTGTGTCTGTAAAGAAGGGGAAAATAAGAAGGATCCTGAGTTGCAATTTGCTGTTTGTAGGCGTTGTCCAAACTCATATCATCGCAAATGTTTGCCAAGAGAAATTTCTTTTGACAACGAAAATGATGAAGATATTATACCAAGGGCTTGGGAAGGTCTTTTATCAGACAATCGCATTCTTATATATTGCTTGGATCATGAGATTGATGATGAACTTGGGACTCCTATTAGAGATCATATTAAATTCCCCAATTTGAAAGTTATTGCTCGAGAAATTAATACTGCTAAGGAAAAGATGAAGCACCCAGCCATAGATAGAGTAATATCGAAGAAGAACAATGTTGACTTAGATAATTCATCTGACAAAAGCACCTCTAAAGTGACTGGAAAACTGTCTCCAGCGAAAGTTGGAAGCAAGAAGTCTGAAAATATTATTTCTAGTTCAGATATTTCAAGAAAACCAAAATCAAAAGAAACATCAAAAAGGTGCTCATTTGAGAATAAGAGATCAATCTCAGAGAAATATAAAATGCCTAACAATGAGGAAGACCAGCCCTTATGTGCTCTCATAAATAAGGATTTTATGGGCATTAAGCCTGACATTCAGGGGCCTCTATTAGATGCTGATTCAGAGAGGAGATTGTTGGCTTTGGTGGAAGAAGTTAAATCAGAAGTTACATTGGACAGTGTTAAGAAACAATTTGCTTCTGATTATACTCCCTACTCGTTGAGAAAAGCGGAGAAGGCCATTGTAAATGGGAAGCTGGAGGGAGGATGCAAAATTCAGGATGTACAACCTGTTTGCAACCCTGATGGCTTACTAAAGATTGTTGATAGACTACATTGGTATGCTCAGAACGGTGATACCATTGTGGATTTTTGTTGTGGAGTTAATGATTTTAGCATCCTTATGAAGAAAAAGCTTGAAGAGAGTGGGAAGAAATGCTCATACAAAAGCTATGATATACTTCCAACAAAGAATAATTTTAGTTTTGAAAGGAGAGATTGGATGACTGTCCGTCCAAATGAACTACCTACGGGATCACAATTGATCATGTGCCTCAGCCTCTGCTTTGGAACTAAAACAGCTTTGGCTAACAACTTTTTAGATAAGGCGCTCGAGTTTGAACCAAAGCTCCTACTTCTTATAGTACCACAAGAAGCAGAGAGGCTTGATAAAAAACTGTCATCGTATGATCTCGTCTGGGAGGACAAGAATTTTCAGTCAGGCTTGTCTTTTTATGTAACCGGATCAGTTGATGTAAATGACAAACAAGTCGGGCAGTGGAATGCAAAGCCCCATGTACTCTCTTTTTGGAGCCGTCGTGACTGGACTACTAAACACAAGGTCATAGCCCAGGAGCACGGTCACGTCTCCTACTCGCATGAAGTATTAGAGATGGATACTGAGAACCACATGCTGAGTTATGATCTTCTGCAGTCAACTGATGATAAAGAAGATCAAGCATCAATGGATGAAGGTAAGAAAAGCAGCGCACGTCATGGTAATGTTGACCAAGAGAGTAAAAAGGAACCAAAATGTATGAAGAGTAAGTCTGGCAAGACGTCACGGAAGAGGAAGCATATTGAGGAAGATTATAGCTTACCAGCCAAAAGGCAAGCTGTAAATGGAATGACTGGAGAAGTACCTAACCGTATTCAACCCAATCCAAATAATAGGAGTTCCTCAGCTGAAGGTTCTGAGCCCGAACCTGTTATCACCTGTCCAAATGTTGAGGTTAGTGATAATACTAGGATCAAAGAAGGGTCAAGTGTTGTGAGTGCCCTTTCTGGTTCTAGTGGTACAAGTAAAGGGGAACACGGCGGCAAGGGTGAGGAAGAAAAGCAACAGATAGAGTCAGATGAAACGGAACCTAGTTCAGCAACCAAGCGATCTTATAAGTTGAACCATGTCCGGATGATGGGTTCGGAAACTCCTACAGTTATTAGAAGTTGCACCTGTCAAGGCAGTGTGCCCGAACCTGGATATGTTGCTAGGCAGCTGAGCTTTGCATCTGGTCCCAACCTTGAATATTCGCTGCGGCATTCAGTTGGTTGGCTTGATGAGTAG | 3090 | 0.399 | MKKGMANSDDNDEPQSLCLSNYHLDDDNDTPLSFIVLPIKWSESDEDDSVEQKKVFIHGYVHPNRLKKMFPVKAWSFNLSSLKPILSLQTKDGNWIKLKSPRKSFEATIRTILITIHFLHYAKKYPKLSSSRSVWDNLSKVKELSSYKLKPSLSDLLNHMHLISEVAKRDDILAKSKLLLTILEENPGSQKLSDEKARDMMDEANEESEPEDDVCALCDNGGNLVCCDGACKRSFHATVEHGRESMCASLGLTKKEVDKKTFYCSNCEHKQHQCFACGKLGYSGVAKGAEVIQCDSATCYHFYHPHCVAKLLPQVVKHDVEGLERNIADGNHFTCPVHYCCVCKEGENKKDPELQFAVCRRCPNSYHRKCLPREISFDNENDEDIIPRAWEGLLSDNRILIYCLDHEIDDELGTPIRDHIKFPNLKVIAREINTAKEKMKHPAIDRVISKKNNVDLDNSSDKSTSKVTGKLSPAKVGSKKSENIISSSDISRKPKSKETSKRCSFENKRSISEKYKMPNNEEDQPLCALINKDFMGIKPDIQGPLLDADSERRLLALVEEVKSEVTLDSVKKQFASDYTPYSLRKAEKAIVNGKLEGGCKIQDVQPVCNPDGLLKIVDRLHWYAQNGDTIVDFCCGVNDFSILMKKKLEESGKKCSYKSYDILPTKNNFSFERRDWMTVRPNELPTGSQLIMCLSLCFGTKTALANNFLDKALEFEPKLLLLIVPQEAERLDKKLSSYDLVWEDKNFQSGLSFYVTGSVDVNDKQVGQWNAKPHVLSFWSRRDWTTKHKVIAQEHGHVSYSHEVLEMDTENHMLSYDLLQSTDDKEDQASMDEGKKSSARHGNVDQESKKEPKCMKSKSGKTSRKRKHIEEDYSLPAKRQAVNGMTGEVPNRIQPNPNNRSSSAEGSEPEPVITCPNVEVSDNTRIKEGSSVVSALSGSSGTSKGEHGGKGEEEKQQIESDETEPSSATKRSYKLNHVRMMGSETPTVIRSCTCQGSVPEPGYVARQLSFASGPNLEYSLRHSVGWLDE* | 1030 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan2g1339 | 1029 | MobiDBLite | consensus disorder prediction | 454 | 507 | - | - | |
Lan2g1339 | 1029 | MobiDBLite | consensus disorder prediction | 823 | 875 | - | - | |
Lan2g1339 | 1029 | SUPERFAMILY | FYVE/PHD zinc finger | 202 | 271 | IPR011011 | - | |
Lan2g1339 | 1029 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 205 | 270 | IPR013083 | - | |
Lan2g1339 | 1029 | MobiDBLite | consensus disorder prediction | 887 | 908 | - | - | |
Lan2g1339 | 1029 | PANTHER | ENHANCED DOWNY MILDEW PROTEIN | 613 | 957 | - | - | |
Lan2g1339 | 1029 | PANTHER | ENHANCED DOWNY MILDEW PROTEIN | 5 | 600 | - | - | |
Lan2g1339 | 1029 | PANTHER | PHD FINGER-CONTAINING PROTEIN DDB_G0268158 | 5 | 600 | - | - | |
Lan2g1339 | 1029 | PANTHER | PHD FINGER-CONTAINING PROTEIN DDB_G0268158 | 613 | 957 | - | - | |
Lan2g1339 | 1029 | MobiDBLite | consensus disorder prediction | 823 | 972 | - | - | |
Lan2g1339 | 1029 | Coils | Coil | 1027 | 1029 | - | - | |
Lan2g1339 | 1029 | MobiDBLite | consensus disorder prediction | 917 | 944 | - | - | |
Lan2g1339 | 1029 | SMART | PHD_3 | 214 | 268 | IPR001965 | - | |
Lan2g1339 | 1029 | SMART | PHD_3 | 273 | 339 | IPR001965 | - | |
Lan2g1339 | 1029 | SMART | PHD_3 | 340 | 407 | IPR001965 | - | |
Lan2g1339 | 1029 | MobiDBLite | consensus disorder prediction | 946 | 968 | - | - | |
Lan2g1339 | 1029 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 271 | 390 | IPR013083 | - | |
Lan2g1339 | 1029 | CDD | PHD2_NSD | 273 | 338 | - | - | |
Lan2g1339 | 1029 | MobiDBLite | consensus disorder prediction | 491 | 507 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan2g1339 | Lan-Chr2 | 24133997 | 24141329 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan2g1339 | 203 | 315 | PHD Transcription Factor Family | AT3G14980 | 28.571 | 4.80e-07 | 52.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan2g1339 | - | - | lang:109342095 | 2042.7 |