Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1333 ATGGGGTTGCTTCTTCAATCAATAGCTTTCTCTCTAATTTTGTTCATTATCATCTCAATATTGAAGCTAAGTGAAGCCATTGATTGTGGAGGAATGAACATTGCAAGTAATATCACTGTTGATCAACATGACAAAGGAGCATTCCAAACTATTCAAGCTGCCATTGATTCCATAAAGAGCTTCAATGATCAATGGGTTAAGATTCACATAAATGCTGGCACATACATGGAAAAGGTTGGAATTCCTGAAGATAAGCCATGTGTTTTTTTAGAAGGAGATGACATGAGTAACACAATAGTCACATATGGTGACCATGAACAAACAGATTCAAGTGCTACATTTACATCAATTCCATCTAATGTGATTGTGAGTGGTGTTACTTTTAAGAATTCGTATAATTTGGGACCATACTCTAAATTGAGCAATGTCACAAATGGAACATTTGATGATATTAAACCAGCTGCAGCAGCAAGAATATATGGAGACAAAACTTACTTGTACAAGTGTGGGTTTTGGGGTTTTCAAGATACTTTGTTTGATCAATTAGGACGCCATTACTTTAAAGATTGTTACATTCAAGGTGAAGTTGATTTCATCTTTGGTTATGCCCAATCCATTTATGAGAATTGCTGGATAAATGCAACACAAGGTGAATCAAATTCTCCTGGTTATGTAACAGCCCATGGGAGACAAACATCAACAGACCCAGGTGGTTTTGTATTTTTAAAAGGTTACCTTATTGGGAATGGTAAAGTTAATCTTGGAAGAGCATGGGGCCCTTACTCTAGGGTTATATTTCATAGAATGTACATGTCTCAAGTTGTTACTCCTCAAGGATGGGATGCATGGGATTACATTGGCCATGAGTAA 870 0.3655 MGLLLQSIAFSLILFIIISILKLSEAIDCGGMNIASNITVDQHDKGAFQTIQAAIDSIKSFNDQWVKIHINAGTYMEKVGIPEDKPCVFLEGDDMSNTIVTYGDHEQTDSSATFTSIPSNVIVSGVTFKNSYNLGPYSKLSNVTNGTFDDIKPAAAARIYGDKTYLYKCGFWGFQDTLFDQLGRHYFKDCYIQGEVDFIFGYAQSIYENCWINATQGESNSPGYVTAHGRQTSTDPGGFVFLKGYLIGNGKVNLGRAWGPYSRVIFHRMYMSQVVTPQGWDAWDYIGHE* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1333 289 Pfam Pectinesterase 37 284 IPR000070 GO:0030599|GO:0042545
Lan2g1333 289 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 289 - -
Lan2g1333 289 Gene3D - 31 289 IPR012334 -
Lan2g1333 289 PANTHER PECTINESTERASE 1 289 - -
Lan2g1333 289 SUPERFAMILY Pectin lyase-like 34 284 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1333 Lan-Chr2 24100791 24102398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1333 2 289 Carbohydrate Esterase AT2G19150 43.686 9.47e-79 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1333 - - lang:109328531 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1333 2 24100791 24102398 Lan2g1333 2 24100791 24102398 ECH