Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1325 ATGGCACTTAGTGTTGCTTCTCCATCAACTAACTCAACTCCACTAAGGAAATGGAAGTATGAAGTTTTCTTGAGTTTTAGAGGAGCAGACACACGTTTTGGCTTCACAGACCATTTATACAATGGTTTGAAGAATAAAGGTATAGTTACTTTCAGAGACAAAGAAGGACTTGAAAGAGGAGAACTTATTTCAGAAGAACTTTTCAAAGCAATTGAGGAATCCTTGTGTGCAATAGTGATTCTATCTCAAAACTATGCTTCTTCAACATGGTGTTTGAAAGAACTCAAGAAAATACTTGAATCTAAAAACAACTTGGGTCAACATGTTTTGCCTATATTTTATGGTGTTGAACCTTCTGATGTAAAACGCCAGAAGGGTAGTTTTGCTGAAGCATTCAAGATACACGAGAGAAGATTTAAGGATGATAAACAACAAGTGCAGAATTGGCGAGGTGCTTTAACTCAAGTTGCTGACTTAGCTGGCCTAAGTTCCATTAATTGCTACGGTAATAATATTTTGGATCATATTAATTTGATAACAGATAGCAGATGGATGCCAATGGAGAAAGTACAAAGGTGTGGTGAAGACAGAAGTGTGTTGATGACTACATATGAAGGGCAACATAACCATCCACTCCCTCCAACTGCAAAGGCAATGGCTTCAACAACATCTGCAGCAGCATCAATGCTTCTTTCAGGATCAATGCCAAGCTCTGATGGCCTAATTAATCCAAGCATATTAGAAAGTGCTGCACTTCCTTATTCACACAACAACATGGTTACTCTCTCTTGCTCAGCTCCATTTCCAACTATCACATTAGATCTTACTCAACAAAGTGCTACAAGTTCCTCATCACAGCAACAAAGGGACCATCTTAATCTCCTAAATCCACTTTCATCATTTACTGACACAGTTAATGCAGCTACTGCTGCTATCACTGCAGACCCTAATTTCACATCAGCTCTTGTTGCTGCTATAACATCTATTATTGGAAGGTCACATCCAAACAACAGTGGCAATGTCATGCATAATCAAAGATCTAATAATGATGAAGCACAACAAGGGCTTGCACTCTACACTATGTGTGGGCTTCCAATGGCACTTAGTGTTGCTTCTCCATCAACTAACTCAACTCCACTAAGGAAATGGAAGTATGAAGTTTTCTTGAGTTTTAGAGGAGCAGACACACGTTTTGGCTTCACAGACCATTTATACAATGGTTTGAAGAATAAAGGTATAGTTACTTTCAGAGACAAAGAAGGACTTGAAAGAGGAGAACTTATTTCAGAAGAACTTTTCAAAGCAATTGAGGAATCCTTGTGTGCAATAGTGATTCTATCTCAAAACTATGCTTCTTCAACATGGTGTTTGAAAGAACTCAAGAAAATACTTGAATCTAAAAACAACTTGGGTCAACATGTTTTGCCTATATTTTATGGTGTTGAACCTTCTGATGTAAAACGCCAGAAGGGTAGTTTTGCTGAAGCATTCAAGATACACGAGAGAAGATTTAAGGATGATAAACAACAAGTGCAGAATTGGCGAGGTGCTTTAACTCAAGTTGCTGACTTAGCTGGCCTAAGTTCCATTAATTGTTATGAAACAGAACTCATTGAAAACATTGCTGAAACAGTTTGTGCAAAATTACTTCGAAGATTGTCTTTTAGCTTTGATGGTTTAGTTGGAATTGGTTCAAAAGTTGCAGAGATGAAATCACTTTTAGAGATGGGATTAGAGGATGATGTTTGTTTTGTTGGAATATGGGGCATGGGTGGAGTAGGTAAAACAACTCTTGCTAGTGTTGTCTATGAAGGGATCAGAGATGAATTTGAAACTAGTTGCTTTATTGCAAATGTTAGAGAGGTTTCTGAGAAATATGGTTTAGCTCATTTACAAAAAGAACTTCTTTCTCCTCTCATTGAAATAAAAAATGAATATGAAGGGAGAGAGAAAATAAGACACTTTTTAAGTCATATGAAAGTTCTTATTGTCCTTGATGATGTTAGTGATAAAAGACAACTAGACAATTTAGTTGGAAAACATGAGTGGTTTGGTAAAGGAAGCAGAGTAATTGTAACCACTAGAGATAAGCATTTGCTAACACCAAAAAGACTATTCAAAAACTATGATATTGAAATGTTAAGTAGTGATGAATCACTTAAGCTCTTATGTGTAAATGCATTTCATAATGATCAACCTGAAGATGGTTTTTTGGATATTTCCAAAGGTATATGTAACCTTTGTGGAGGGCTTCCTTTAGCACTTGAAGTGATGGGTTCATTTCTTTGTGAAAGGAGTGTTTTTGAATGGCAAGATGCTTTAAATAGGATGGAACAAAATGTAGGAGATGGTGATGTTATTCTCAAGACACTTCAAATAAGTTATGATGGATTGAGAAAGGGAGATAGAGCTATATTTCTAGATATTGCATGTTTTTTCAACAATATGGAAGAGAATATGTTGAGAACATTCTTGAAAGATCGTGGTCTTAATTCAATTCTTGGACTCAATATGCTTCTTGAGAAATCACTGGTAAGTTATAATAAGACACGTATTCGAATGCACGATATGCTTGTCCAATTGGGCAAGACTATGGTGTTGGATGAATCTTATGACGATGCTGGCAAACGCAGTAGGTTATGGTCTCAGAAGGATATTGATAAAGTAATGGGAGAAAATGAGGGAGGAAAAGAAATTCAAGGGATAGTTTTCACCTCGCCAAAACCATATCAGGCAGATTGGGACGAAAATTGCTTCGCCGAGATGAAAGGTCTTAGGTTACTTGTGCTACAAAATGTGCATCTTTTACATGGTCTAAGATCTCTTCCTAGTGCATTGAAAGTTCTTGTTTGGGAGGGATATGCTATGAATGCTCTGCCACACATTGCTCAATCAAATGAACTTGTGAGTCTTATGTTGCCTTGTAGCAAACTGTCACAACTTTGGAATAACACACAGGTTTTAGGAAAGTTGAGGGTCATGGATCTGCGCCACTCCAAAGATCTTACTACAACTCCAGAGTTTGATAGAATTCCAAATCTAGAATCATTGATCCTGGAAGGTTGTGTAAGTTTAGATCAGGTTCATGAATCTTTTGGAAACCATAAGAAGCTTGTCAAAGTGGATTTCACAGGTTGCAAGAATCTAATGACCCTGCCAAGTAAATTGTGGATGAATTCACTAGAGACATTGATTTTAACTGGCTGCATAAAACTTGAAAATCTCCCTGAATTTGATGAAAATATGCAAAGCCATCAATGCTTCACTTAG 3270 0.37 MALSVASPSTNSTPLRKWKYEVFLSFRGADTRFGFTDHLYNGLKNKGIVTFRDKEGLERGELISEELFKAIEESLCAIVILSQNYASSTWCLKELKKILESKNNLGQHVLPIFYGVEPSDVKRQKGSFAEAFKIHERRFKDDKQQVQNWRGALTQVADLAGLSSINCYGNNILDHINLITDSRWMPMEKVQRCGEDRSVLMTTYEGQHNHPLPPTAKAMASTTSAAASMLLSGSMPSSDGLINPSILESAALPYSHNNMVTLSCSAPFPTITLDLTQQSATSSSSQQQRDHLNLLNPLSSFTDTVNAATAAITADPNFTSALVAAITSIIGRSHPNNSGNVMHNQRSNNDEAQQGLALYTMCGLPMALSVASPSTNSTPLRKWKYEVFLSFRGADTRFGFTDHLYNGLKNKGIVTFRDKEGLERGELISEELFKAIEESLCAIVILSQNYASSTWCLKELKKILESKNNLGQHVLPIFYGVEPSDVKRQKGSFAEAFKIHERRFKDDKQQVQNWRGALTQVADLAGLSSINCYETELIENIAETVCAKLLRRLSFSFDGLVGIGSKVAEMKSLLEMGLEDDVCFVGIWGMGGVGKTTLASVVYEGIRDEFETSCFIANVREVSEKYGLAHLQKELLSPLIEIKNEYEGREKIRHFLSHMKVLIVLDDVSDKRQLDNLVGKHEWFGKGSRVIVTTRDKHLLTPKRLFKNYDIEMLSSDESLKLLCVNAFHNDQPEDGFLDISKGICNLCGGLPLALEVMGSFLCERSVFEWQDALNRMEQNVGDGDVILKTLQISYDGLRKGDRAIFLDIACFFNNMEENMLRTFLKDRGLNSILGLNMLLEKSLVSYNKTRIRMHDMLVQLGKTMVLDESYDDAGKRSRLWSQKDIDKVMGENEGGKEIQGIVFTSPKPYQADWDENCFAEMKGLRLLVLQNVHLLHGLRSLPSALKVLVWEGYAMNALPHIAQSNELVSLMLPCSKLSQLWNNTQVLGKLRVMDLRHSKDLTTTPEFDRIPNLESLILEGCVSLDQVHESFGNHKKLVKVDFTGCKNLMTLPSKLWMNSLETLILTGCIKLENLPEFDENMQSHQCFT* 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1325 1089 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 161 IPR035897 -
Lan2g1325 1089 SUPERFAMILY Toll/Interleukin receptor TIR domain 375 526 IPR035897 -
Lan2g1325 1089 Gene3D WRKY domain 185 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan2g1325 1089 PRINTS Disease resistance protein signature 584 599 - -
Lan2g1325 1089 PRINTS Disease resistance protein signature 655 669 - -
Lan2g1325 1089 PRINTS Disease resistance protein signature 748 762 - -
Lan2g1325 1089 PRINTS Disease resistance protein signature 986 1002 - -
Lan2g1325 1089 ProSiteProfiles WRKY domain profile. 188 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g1325 1089 Gene3D - 379 554 IPR035897 -
Lan2g1325 1089 Gene3D - 14 184 IPR035897 -
Lan2g1325 1089 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 377 1083 - -
Lan2g1325 1089 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 148 - -
Lan2g1325 1089 Pfam TIR domain 384 548 IPR000157 GO:0007165
Lan2g1325 1089 Pfam TIR domain 19 163 IPR000157 GO:0007165
Lan2g1325 1089 ProSiteProfiles TIR domain profile. 18 156 IPR000157 GO:0007165
Lan2g1325 1089 SMART till_3 384 524 IPR000157 GO:0007165
Lan2g1325 1089 SMART till_3 19 159 IPR000157 GO:0007165
Lan2g1325 1089 ProSiteProfiles TIR domain profile. 383 549 IPR000157 GO:0007165
Lan2g1325 1089 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 148 IPR044974 GO:0006952
Lan2g1325 1089 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 377 1083 IPR044974 GO:0006952
Lan2g1325 1089 SUPERFAMILY "Winged helix" DNA-binding domain 787 889 IPR036390 -
Lan2g1325 1089 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 552 809 IPR027417 -
Lan2g1325 1089 Pfam NB-ARC domain 572 796 IPR002182 GO:0043531
Lan2g1325 1089 Gene3D - 713 799 IPR042197 -
Lan2g1325 1089 Gene3D Ribonuclease Inhibitor 914 1089 IPR032675 -
Lan2g1325 1089 Gene3D - 556 704 IPR027417 -
Lan2g1325 1089 SUPERFAMILY L domain-like 914 1078 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1325 Lan-Chr2 24061793 24068851 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1325 385 1083 WRKY Transcription Factor Family AT4G12020 30.345 6.27e-74 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1325 - - lang:109328521 2130.52