Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1324 ATGTCTGCTACATGGAATTATGCCATTGCTATGGCTGATGAGTCTACTACCTCACATTCTAATTCATCAATCATGTCGTTTAGTGATAAACGACTAGTCTTGGATGAGATGGATTTCTTCGCTGAGAATAAGAAAAAGAGCCAAGATGATCATGGTGATGATGATGATGATCAAATGGTGCACCATATAGAGGTTAATGTAGATACTAGCTTAGATCTTCTAACGAAGAATACTGGTGGCAAAAGATCAATAAAGGAAGATAAGGATGATGAGAGAAATGAGCTTGCTGCATTGCTAGCTGAAATGCACGATATGAATGCTGAAAATCTACGTTTGAGAGAGCTGGTTGATCAGGTCAACAATGACTACAATACCCTACACATGCAATTTATCAAGATGATGCAGACACAACATAGCCATGGGGGTGACCAAGTCATAGAGGAAAAGGGTAAGAGAGAATGTAGAGTTCCAAGGCCATTTTTAGAGATGGGTGGTTTTTCTGGAAGGGATAAACCTTTTCAACAATCTTTGGAGGGAAGCATGCAAAGAGAATGCAAAAGTGTGGTTGAATTGATGGAGAACAAGACTGTTCATCAGATTTGCACCAAAAGAGACAATATTGTCTTGGAACCAAATAAGGATAATAATTCCAAAGCAAGAATAATGGAGGAGAGCCCAAGTGACCAAGAATTCCAATTAGGTTGGCTCTCTAATAAAGTTCCTAGGTTGAATTCTTTAATGGATCATAATGTTGATCAACCATCTGAAACCATGTCAATCATCAAGAAAGCTCGTGTATCAGTTCGAGCAAGATCAGAATCTTCAATGATAGCAGATGGATGCCAATGGAGAAAGTATGGGCAAAAGATGGCAAAAGGGAATCCATGTCCGCGAGCTTATTATCGTTGCACCATGAGTACTGGTTGTCCAGTAAGAAAACAAGTACAAAGGTGTGGTGAAGACAGAAGTGTGTTGATGACTACATATGAAGGGCAACATAACCATCCACTCCCTCCAACTGCAAAGGCAATGGCTTCAACAACATCTGCAGCAGCATCAATGCTTCTTTCAGGATCAATGCCAAGCTCTGATGGCCTAATTAATCCAAGCATATTAGAAAGTGCTGCACTTCCTTATTCACACAACAACATGGTTACTCTCTCTTGCTCAGCTCCATTTCCAACTATCACATTAGATCTTACTCAACAAAGTGCTACAAGTTCCTCATCACAGCAACAAAGGGACCATCTTAATCTCCTAAATCCACTTTCATCATTTACTGACACAGTTAATGCAGCTACTGCTGCTATCACTGCAGACCCTAATTTCACATCAGCTCTTGTTGCTGCTATAACATCTATTATTGGAAGGTCACATCCAAACAACAGTGGTACCAATAATACAAGTGGAGATCAATAG 1419 0.3996 MSATWNYAIAMADESTTSHSNSSIMSFSDKRLVLDEMDFFAENKKKSQDDHGDDDDDQMVHHIEVNVDTSLDLLTKNTGGKRSIKEDKDDERNELAALLAEMHDMNAENLRLRELVDQVNNDYNTLHMQFIKMMQTQHSHGGDQVIEEKGKRECRVPRPFLEMGGFSGRDKPFQQSLEGSMQRECKSVVELMENKTVHQICTKRDNIVLEPNKDNNSKARIMEESPSDQEFQLGWLSNKVPRLNSLMDHNVDQPSETMSIIKKARVSVRARSESSMIADGCQWRKYGQKMAKGNPCPRAYYRCTMSTGCPVRKQVQRCGEDRSVLMTTYEGQHNHPLPPTAKAMASTTSAAASMLLSGSMPSSDGLINPSILESAALPYSHNNMVTLSCSAPFPTITLDLTQQSATSSSSQQQRDHLNLLNPLSSFTDTVNAATAAITADPNFTSALVAAITSIIGRSHPNNSGTNNTSGDQ* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1324 472 Coils Coil 81 122 - -
Lan2g1324 472 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 15 465 IPR044810 GO:0003700
Lan2g1324 472 SUPERFAMILY WRKY DNA-binding domain 270 338 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan2g1324 472 ProSiteProfiles WRKY domain profile. 272 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g1324 472 SMART WRKY_cls 277 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g1324 472 PANTHER WRKY TRANSCRIPTION FACTOR 6-LIKE 15 465 - -
Lan2g1324 472 Pfam WRKY DNA -binding domain 279 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g1324 472 Gene3D WRKY domain 262 339 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1324 Lan-Chr2 24057034 24060772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1324 22 401 WRKY Transcription Factor Family AT1G62300 46.599 1.16e-86 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan2g1324 WRKY 3.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1324 - - adu:107496306 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1324 2 24057034 24060772 Lan11g0072 11 415694 418565 LSH
Lan2g1272 2 23706791 23708677 Lan2g1324 2 24057034 24060772 PCT
Lan9g1447 9 21296033 21298343 Lan2g1324 2 24057034 24060772 PCT
Lan2g1324 2 24057034 24060772 Lan2g1324 2 24057034 24060772 PCT
Lan2g1324 2 24057034 24060772 Lan11g0072 11 415694 418565 PCT
Lan11g0072 11 415694 418565 Lan2g1324 2 24057034 24060772 PCT