Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1307 ATGCCTATTACCAACACTTTTCCAACTATGACTAACTGGTTTTCTAGAATGGTAGAAGCAGTAACAAGGTGTAAGGAAGATTTTTCTTCATCAGTTTTTGCTGCCATTTATGGTTCTTCAGTTGGAGTATTCATGATAGTTTTGGAGAGAGTTCTTTTTGCTGCATTTACTTGCACTCTAGCACTTGGAGGGTCAATCATTGGAACAATTGCAGGAGCAATCAGAGGTCAAACAACAGAAGCTGGTTTTCTTGATGGTGCTGGCAAAGGAGCAGTGACAGGAGCCATTGCAGCTATAGAATTGGTTAATTATGTTGCAGTTGGTGAGCCATTATCAGAGGTTACTATGTTAAGCAGTTTCTTGAATGGCAAAGTGTTCATAGATTGGATATGTCCAGCTGCTGCACATGCCTATGAATTTCATCATATAAATACATCAGAAACAAGTTACATAGAAGTGTCAGATATTTATGATAATTTTGGAGGATTCAAAGGGATACCCCAAAATTTGATTCTAAAGCTTCCTTTTGAACAATACAACTCAAGCAAAATGATGAAATTGCACAATAAGATAAGCTGCACAATATGCTTACAGGATTTTGAGGATGGAGAACTGGTGAACATACTTCCAAAATGTGGCCACATTTTTCATTTAGAATGCATAGATAAATGGCTAATTCAACAATGGTCATGCCCAATGTGTAGAACTTATGTTCATCATCATAGCAATTGTTAA 735 0.3687 MPITNTFPTMTNWFSRMVEAVTRCKEDFSSSVFAAIYGSSVGVFMIVLERVLFAAFTCTLALGGSIIGTIAGAIRGQTTEAGFLDGAGKGAVTGAIAAIELVNYVAVGEPLSEVTMLSSFLNGKVFIDWICPAAAHAYEFHHINTSETSYIEVSDIYDNFGGFKGIPQNLILKLPFEQYNSSKMMKLHNKISCTICLQDFEDGELVNILPKCGHIFHLECIDKWLIQQWSCPMCRTYVHHHSNC* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1307 244 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 17 238 IPR044523 -
Lan2g1307 244 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 17 238 - -
Lan2g1307 244 SMART ring_2 193 234 IPR001841 -
Lan2g1307 244 SUPERFAMILY RING/U-box 186 240 - -
Lan2g1307 244 CDD RING-H2_PA-TM-RING 193 235 - -
Lan2g1307 244 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 162 240 IPR013083 -
Lan2g1307 244 ProSiteProfiles Zinc finger RING-type profile. 193 235 IPR001841 -
Lan2g1307 244 Pfam Ring finger domain 192 235 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1307 Lan-Chr2 23956137 23958703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1307 47 238 C3H Transcription Factor Family AT5G66070 33.831 1.29e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1307 - K19041 gmx:100305612 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1307 2 23956137 23958703 Lan2g1307 2 23956137 23958703 ECH
Lan2g1307 2 23956137 23958703 Lan9g1469 9 21416365 21418447 LSH