Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1295 ATGAGCTTCTTTTCATGCTGTGCTTCACAAGAGAAGATTGATAAAAAGTCATTGAAGAAGAATATTCAGGACTACCATGATGCAAAAACTCAACCATCATTTGCTAACATATCTTTCAAAACTGACAGTGGCAAAAGAAAGTATATAGAAGATGAAATAGCAAAAATGGGGAAAGGAAATATTACCTCTCAGATATTTTCTTATCGCGAGCTAAGTTTTGCAACTAAGAACTTTCACCCTGACAAAATGATCGGGGAAGGAGGCTTCGGGAGAGTATACAAAGGACGTATGAAAAACACGAATCAAGTTGTTGCTGTAAAGCAACTTAATAGGAATGGATTTCAAGGAAACAGAGAATTTCTGGTTGAAGTTTTGATTTTGAGTCTCTTGCACCACCCTAACCTTGTCAATTTAGTAGGGTATTGTGCTGATGGTGAACAAAGGATTTTGGTATATGAGTACATGGTGAATGGTTCATTAGAAGATCACCTTCTTGAGCTGGCTCAAGAGAGAAAACCTTTGGAGTGGCATACAAGAATGAAAATAGCACAAGGTGCAGCAAAAGGACTTGAATATTTACATGATGTAGCAAACCCTCCAGTGATATATAGAGATTTCAAAGCATCAAACATACTATTAGATGAAAACTTCAATCCAAAACTATCTGATTTTGGACTAGCAAAGCTTGGTCCAACAGGTGATAAAACACATGTATCCACAAGGGTGATGGGAACTTATGGCTATTGTTCTCCTGAGTATGCCTCAACAGGACAATTAACTACAAAATCTGATGTATATAGCTTTGGAGTAGTGTTCTTGGAGATGATCACAGGAAGAAGAGTTATTGATCATTCAAGACCTTATGAAGAACAAAACTTAGTCACGTGGGCACAACCACTATTCAAGGACAGGAGGAAATTTACATCAATGGCTGATCCATTGTTGGAAGGGAAGTACCCTATAAAGGGTCTATACCAAGCACTAGCAGTTGCAGCAATGTGTCTTCAGGAGGAAGCAGATACTAGGCCTTTGATTAGTGATGTAGTTACAGCACTTGATGTTTTAGCAACTAAGCATGCAGAAGTTGCAAAAGAGATTTACTCTGAAGTTTGA 1113 0.3801 MSFFSCCASQEKIDKKSLKKNIQDYHDAKTQPSFANISFKTDSGKRKYIEDEIAKMGKGNITSQIFSYRELSFATKNFHPDKMIGEGGFGRVYKGRMKNTNQVVAVKQLNRNGFQGNREFLVEVLILSLLHHPNLVNLVGYCADGEQRILVYEYMVNGSLEDHLLELAQERKPLEWHTRMKIAQGAAKGLEYLHDVANPPVIYRDFKASNILLDENFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCSPEYASTGQLTTKSDVYSFGVVFLEMITGRRVIDHSRPYEEQNLVTWAQPLFKDRRKFTSMADPLLEGKYPIKGLYQALAVAAMCLQEEADTRPLISDVVTALDVLATKHAEVAKEIYSEV* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1295 370 Gene3D Transferase(Phosphotransferase) domain 1 155 369 - -
Lan2g1295 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Lan2g1295 370 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Lan2g1295 370 Gene3D Phosphorylase Kinase; domain 1 49 154 - -
Lan2g1295 370 PANTHER OS07G0668900 PROTEIN 1 365 - -
Lan2g1295 370 CDD STKc_IRAK 84 353 - -
Lan2g1295 370 ProSiteProfiles Protein kinase domain profile. 78 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1295 370 SUPERFAMILY Protein kinase-like (PK-like) 62 350 IPR011009 -
Lan2g1295 370 Pfam Protein kinase domain 79 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1295 370 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1295 Lan-Chr2 23863666 23866181 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1295 60 357 Glycoside Hydrolase AT3G07070 72.819 1.89e-164 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lan2g1295 Pkinase 3.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1295 - - gmx:100798032 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1295 2 23863666 23866181 Lan2g1295 2 23863666 23866181 ECH
Lan4g0971 4 12624998 12628739 Lan2g1295 2 23863666 23866181 LSH
Lan4g0971 4 12624998 12628739 Lan2g1295 2 23863666 23866181 PCT
Lan2g1295 2 23863666 23866181 Lan2g1295 2 23863666 23866181 PCT
Lan2g1295 2 23863666 23866181 Lan4g0971 4 12624998 12628739 PCT