Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1289 ATGATTTGCACTCTGAAACATCCTGGTATAGCGATCCGAGGTTCTGGTCTTGTTTTCCGGGAAAAGGGTATAACAAAATCTTCAGTTCAATCATGTTCCCTTTTTTCAAGAGGAAAAATCCCTCAGAGATCTATGGTTTCAGTGCAAAAGCCACTTCACCTTTCTTCTGTTATTGGTGTTGGGAACCTTGTTAAGCCTTTGAGAAGTGAAAAAAGTGATTTTGTTTGTGGAGCTTATGAGGCAGATAGATCAGAGGTTGAAGGAATTGAGGGTCCATCAGAGGCTGCTAAGAAGGTTAAAATTGGGATATATTTTGCAACATGGTGGGCTTTGAATGTGGTCTTCAATATTTATAACAAGAAGGTTTTGAATGCTTACCCTTATCCTTGGCTTACTTCAACTCTCTCACTTGCATGTGGTTCTCTTATGATGTTGATCTCATGGGCCACAAGGATAGCTGAGACACCTAAGACTGATCTTGAGTTTTGGAAGTCTTTGTTCCCTGTTGCTATTGCACATACAATAGGGCATGTAGCTGCAACTGTTAGTATGTCAAAAGTTGCAGTATCATTCACTCATATTATCAAGAGTGGAGAGCCTGCTTTCAGTGTTCTGGTTTCAAGATTCATTTTGGGTGAAACCTTCCCTGTGCCAGTCTATCTGTCTTTAGTTCCAATCATTGGTGGATGCGCACTTGCCGCTGTGACTGAGCTCAATTTCAATATGATTGGCTTTATGGGGGCTATGATATCGAACTTGGCGTTTGTATTCCGTAATATCTTTTCGAAAAAGGGCATGAAGGGAAAGTCGGTCAGCGGAATGAATTACTATGCTTGTTTATCTATTCTGTCTCTGGTAATTCTCACACCATTTGCAATTGCTGTGGAAGGACCAAAGGTTTGGGCAGCTGGATATCAAACAGCCCTATCTCAAATTGGACCTCAATTTTTATGGTGGGTGGTAGCTCAGAGTGTATTTTATCATCTATACAATCAGGTGTCATACATGTCTTTGGATGAGATCTCTCCCTTGACATTTAGCATTGGAAACACCATGAAACGTATATCTGTTATAGTTTCTTCAATCATCATCTTCCATACACCTGTTCAACCCGTGAATGCGCTCGGAGCTGCTATCGCCGTCTTCGGAACCTTCTTGTATTCTCAGGCAAAACAGTAG 1179 0.4122 MICTLKHPGIAIRGSGLVFREKGITKSSVQSCSLFSRGKIPQRSMVSVQKPLHLSSVIGVGNLVKPLRSEKSDFVCGAYEADRSEVEGIEGPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAETPKTDLEFWKSLFPVAIAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPVPVYLSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLVILTPFAIAVEGPKVWAAGYQTALSQIGPQFLWWVVAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAVFGTFLYSQAKQ* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1289 392 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 100 391 IPR004696 GO:0016021|GO:0022857|GO:0055085
Lan2g1289 392 Pfam Triose-phosphate Transporter family 100 388 IPR004853 -
Lan2g1289 392 PANTHER SOLUTE CARRIER FAMILY 35 43 391 - -
Lan2g1289 392 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 43 391 - -
Lan2g1289 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 142 235 - -
Lan2g1289 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 291 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1289 Lan-Chr2 23829605 23833015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1289 35 391 Antiporters AT5G54800 80.495 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1289 K15283 - gmx:100801832 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1289 2 23829605 23833015 Lan2g1289 2 23829605 23833015 ECH
Lan2g1289 2 23829605 23833015 Lan9g1459 9 21365639 21369615 LSH
Lan2g1289 2 23829605 23833015 Lan2g1289 2 23829605 23833015 PCT
Lan2g1289 2 23829605 23833015 Lan9g1459 9 21365639 21369615 PCT
Lan9g1459 9 21365639 21369615 Lan2g1289 2 23829605 23833015 PCT