Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1272 ATGGTGCTCCTAAGGTTTGTAAACTTGGTCTTGTATAAACTACTTGCTAACTCATGTTATAAAGCAGCAAGGAAAGTGAAAAGTTATGGCTTTTATTTAGGCTATTTATCACCAAAAACACCACACAAACTTTCTTTTCCTAGTGTTACTAAATGTGTTTTGGAGGGTAGAGTGTCACAAACACTTATTTGTGACATTCATAATGTACTATTAAGGTCTCACTCTTTCTTTCCTTATTTCATGCTAGTTGCCTTTGAAGGTGGTAGCATTTTCAGGGCACTTCTTTTGCTTTTGTCTTGTCCTATACTTTGGATTCTAGACTATGAACAAAAGCTTAGACTCATGACCTTTATCACCTTTTGTGGCTTAAAAATAAAAAACATGGAAAATACTCCAAGGGCAGTTTTGCCCAAGTTTTATTTGGAGAATCTTAATCTTCATGCTTATGAGGTTCTGGCTTCATCAGGCTCTAAATTTGTATTAACAAGTGTGCCTAGAGTGATGGTAGAAGGGTTTCTGAAGGAGTATTTGAGTGTTGGTGATGTTATAGGCACAGAGTTGCACACTGTTGCAGGTAGCTACTTCACTGGTTTGATATCTGGTTCTGGCTTACTTGTGAAGTGTTTATTTCACTATTCAGTAACTTTGCACATTTGGCAATTGTTCATCACCTTATTTTTCTGCTTCTATAACTCACTAATCCACTATGAAGCTTATATGGTGAACAATGAAGAAGGCAAGAACAACAACCCAAGTTCAGTGATGCCAAGAGAAAAATATCCAAAGCCTCTAATATTTCATGATGGAAGACTAGCATTCTTGCCTACTCCTTCAGCAACTTTCTACATGTTCATATGGCTTCCATTTGGAATCATTTTAGCTATTTATAGAATCCTTCTTGGTATTCTCCTTCCTTACAATTATGCCATGACATTAGGAGTTTTGAGTGGCATAGTACTAAATATCAAAGGCTGCATACCCGAAAAATCAGAGAAAAACAAAGGGTTGCTCTATGTTTGCACACATAGGACACTCTTGGATCCTGTTTTCCTAAGCACAAGTTTGGCAAGGCCTTTAACTGCAGTCACATATAGTGTAAGCAAAGTTTCTGAGTTCATAGCACCAATTAGAACAGTGAGACTAACTAGGGACAGAAAAAAAGATGGTGAAACAATGCAAATGTTACTAAGGGAAGGTGATTTAGTAGTGTGTCCTGAAGGAACAACTTGTAGGGAGCCATATATATTAAGGTTCAGTTCATTGTTTGCTGAAATGGGTGAGGAGATTGTGCCTGTAGCTATGAATGTTAATGTGAGCATGTTCTATGGTACTACAGCTAGTGGACTTAAATGGTTAGACCCATTTTTCTTTTTTATGAATCCTAGGCCTAGTTATCACATTCAAATCCTTGAAAAGGTTCCTAAAGAGTTTACATGTGCTGGTGGATGGTCCAGTTTTGAAGTGGCAAATTATATACAAAGATTGTTGCTGATTGATGTGGATATTGGATATGTCATTTATTTATGA 1527 0.3687 MVLLRFVNLVLYKLLANSCYKAARKVKSYGFYLGYLSPKTPHKLSFPSVTKCVLEGRVSQTLICDIHNVLLRSHSFFPYFMLVAFEGGSIFRALLLLLSCPILWILDYEQKLRLMTFITFCGLKIKNMENTPRAVLPKFYLENLNLHAYEVLASSGSKFVLTSVPRVMVEGFLKEYLSVGDVIGTELHTVAGSYFTGLISGSGLLVKCLFHYSVTLHIWQLFITLFFCFYNSLIHYEAYMVNNEEGKNNNPSSVMPREKYPKPLIFHDGRLAFLPTPSATFYMFIWLPFGIILAIYRILLGILLPYNYAMTLGVLSGIVLNIKGCIPEKSEKNKGLLYVCTHRTLLDPVFLSTSLARPLTAVTYSVSKVSEFIAPIRTVRLTRDRKKDGETMQMLLREGDLVVCPEGTTCREPYILRFSSLFAEMGEEIVPVAMNVNVSMFYGTTASGLKWLDPFFFFMNPRPSYHIQILEKVPKEFTCAGGWSSFEVANYIQRLLLIDVDIGYVIYL* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1272 508 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 1 15 496 - -
Lan2g1272 508 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 278 495 - -
Lan2g1272 508 PANTHER ANCIENT UBIQUITOUS PROTEIN 15 496 - -
Lan2g1272 508 SMART plsc_2 336 437 IPR002123 GO:0016746
Lan2g1272 508 CDD LPLAT 327 496 - -
Lan2g1272 508 Pfam Acyltransferase 327 432 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1272 Lan-Chr2 23706791 23708677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1272 10 493 Acyl Lipid Metabolism Gene Families AT1G06520 53.514 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1272 K13508 - gmx:100803875 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1272 2 23706791 23708677 Lan9g1447 9 21296033 21298343 LSH
Lan2g1272 2 23706791 23708677 Lan11g0279 11 1827994 1830502 LSH
Lan2g1272 2 23706791 23708677 Lan2g1324 2 24057034 24060772 PCT
Lan2g1272 2 23706791 23708677 Lan11g0072 11 415694 418565 PCT
Lan2g1272 2 23706791 23708677 Lan2g1272 2 23706791 23708677 PCT
Lan2g1272 2 23706791 23708677 Lan9g1447 9 21296033 21298343 PCT
Lan11g0279 11 1827994 1830502 Lan2g1272 2 23706791 23708677 PCT
Lan9g1447 9 21296033 21298343 Lan2g1272 2 23706791 23708677 PCT