Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1268 ATGGAGAATGATGACAATGATCCTTTCTATTACAACAACCACCATGAACTCAACCACTCAAGCTTTCCTTTCTTCAGAGAAGACCACCACTCAACACTTGAAAACTTTCAAGGGTTTGTTGATCCATCTCATTCTAGTTTCACTGACTCATTACATGGTAATTCCATGGATTACAACACTCTTTCAAGACCCTTTGACTTGTCTTGTAATTCATCATCTGAAGTGATGACCTCTTCCATTGATGAAAACTCCAAGAAACATAGTAGTGCAGGAGACTTAACAATGATCAGTGAGAACCAATCAACACTGAATTCCTCAGTGTCTTCTTCATCTAATGAAGCAGATCAAGCAGTAACAGAAGAAGACTCAGCAAAAAGTAAGAAAGATAAGCAGCCAAAAGAGTTTGAAGAAGATCATGGAAAGTCTAAGAAAGAGAACAAGCCCAAAAAGAAAGAGAAAAAGGAAAAGGAACCACGCTTTGCCTTCTTGACTAAAAGTGAAGTGGATCATCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCAGTGAAGAATAGTCCATACCCAAGGAGTTACTATAGATGCACGACTCAAAAGTGCAATGTGAAGAAAAGAGTGGAGAGATCATTTGAAGATCCAAGCACAGTGATCACAACATATGAAGGGCAACATAACCATCATTGTCCAGCAACACTACGTGGTAATGCTGTCACTATGTTCTCTTCACCTTCACTTTTTGCATCCACTTCTATAGGACCAAGCTTCCCCCAAGATTTCCTTGCTCAATTGCTTCCAACTTACCCTAATCATCAACATCAACATCATCAAAATCAAAATCAAAATCCCATGATGTTCCATAACCAAAACCTTTCCCATAATCCTCAGCTGCAACCACAAAATCAGCATCAGCATCAGCATCAGCAGCAGCAGCTCCAATTTCCTCGTGACTATGGATTATTGCAAGATCTACTACCTTCATTCCAAGGAAGACAAGAGCCATGA 1008 0.3958 MENDDNDPFYYNNHHELNHSSFPFFREDHHSTLENFQGFVDPSHSSFTDSLHGNSMDYNTLSRPFDLSCNSSSEVMTSSIDENSKKHSSAGDLTMISENQSTLNSSVSSSSNEADQAVTEEDSAKSKKDKQPKEFEEDHGKSKKENKPKKKEKKEKEPRFAFLTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSFEDPSTVITTYEGQHNHHCPATLRGNAVTMFSSPSLFASTSIGPSFPQDFLAQLLPTYPNHQHQHHQNQNQNPMMFHNQNLSHNPQLQPQNQHQHQHQQQQLQFPRDYGLLQDLLPSFQGRQEP* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1268 335 PANTHER WRKY TRANSCRIPTION FACTOR 71-RELATED 30 290 - -
Lan2g1268 335 SUPERFAMILY WRKY DNA-binding domain 164 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan2g1268 335 MobiDBLite consensus disorder prediction 101 158 - -
Lan2g1268 335 MobiDBLite consensus disorder prediction 271 313 - -
Lan2g1268 335 SMART WRKY_cls 171 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g1268 335 Gene3D WRKY domain 156 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan2g1268 335 ProSiteProfiles WRKY domain profile. 166 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g1268 335 MobiDBLite consensus disorder prediction 118 158 - -
Lan2g1268 335 Pfam WRKY DNA -binding domain 172 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g1268 335 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 30 290 IPR044810 GO:0003700
Lan2g1268 335 MobiDBLite consensus disorder prediction 101 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1268 Lan-Chr2 23688708 23690739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1268 38 335 WRKY Transcription Factor Family AT4G18170 44.951 6.92e-59 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan2g1268 WRKY 2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1268 - - aprc:113847247 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1268 2 23688708 23690739 Lan9g1445 9 21287700 21289582 LSH