Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1260 ATGGAGGATGCCAAAGTAGATAGGTCTGATGAGAAGAAAGAAAATGAAGTTGTTCTTCCTGGGTTTAGATTTCATCCAACAGATGAAGAACTTGTTGGGTTTTATCTTATGAGAAAGGTGGAGAAAAAATCTCTTCGAATTGAACTCATCAAACAGATTGATATCTACAAATATGATCCATGGGATCTTCCAAAAGTGAGTAGTGTGGGGGAGAAAGAATGGTATTTCTTTTGCAAGAGAGGGAGAAAGTATAGGAACAGCATAAGGCCAAATAGGGTTACAAAATCTGGATTTTGGAAAGCCACAGGGATTGATAAACCTATATATTCATCATCATTAGAGGAATGTGTAATTGGTCTCAAGAAATCATTGGTCTATTATCGTGGAAGTGCTGGAAAAGGAACCAAAACTGATTGGATGATGCATGAGTTTCGTCTTCCACTACCTAATGCAAATACTTCTACCAATAATCCACAATCTAATGATCTTCACTTAGAAGCTGAAGTATGGACACTATGCAGAATATTGAAACGCATTCCATCTTACAAGAAGTACACACCACCTTTGAAACACTCAAAACCAAACCAAAGTAATTCTTCAACTTCTAAAACATGCAGCTTTGAATCTGACAACACCAACCCATATTTGACTTTCACAGATTCAGTTGTCGTTCAACAAAATGAAACTAAACCTGTTATTGAACATGTTGACCAAAGGAACCACTTTTTTCTAACTCAATTTGCCAATGTAGCTCAGCCTCCAACAACCTTGTCTTACCCAACTTTTTGGAACCAGAATAATGTTGTTGATGATGTTTTTGCAAATGAAAATTGGGATGATCTCAGATCTGTGGTACAGTTTGCTATGGATCCATCCAAGGATTATTATCATTGTAAATAA 900 0.3644 MEDAKVDRSDEKKENEVVLPGFRFHPTDEELVGFYLMRKVEKKSLRIELIKQIDIYKYDPWDLPKVSSVGEKEWYFFCKRGRKYRNSIRPNRVTKSGFWKATGIDKPIYSSSLEECVIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPLPNANTSTNNPQSNDLHLEAEVWTLCRILKRIPSYKKYTPPLKHSKPNQSNSSTSKTCSFESDNTNPYLTFTDSVVVQQNETKPVIEHVDQRNHFFLTQFANVAQPPTTLSYPTFWNQNNVVDDVFANENWDDLRSVVQFAMDPSKDYYHCK* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1260 299 MobiDBLite consensus disorder prediction 190 208 - -
Lan2g1260 299 PANTHER - 7 299 - -
Lan2g1260 299 SUPERFAMILY NAC domain 12 177 IPR036093 GO:0003677|GO:0006355
Lan2g1260 299 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 299 - -
Lan2g1260 299 MobiDBLite consensus disorder prediction 186 208 - -
Lan2g1260 299 Gene3D NAC domain 27 181 IPR036093 GO:0003677|GO:0006355
Lan2g1260 299 ProSiteProfiles NAC domain profile. 18 178 IPR003441 GO:0003677|GO:0006355
Lan2g1260 299 Pfam No apical meristem (NAM) protein 20 146 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1260 Lan-Chr2 23635877 23639515 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1260 2 178 NAC Transcription Factor Family AT5G39820 60.317 3.19e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan2g1260 NAM 1.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1260 - - gmx:100784323 426.787