Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1243 ATGGCACATAATTCTCTTGTACCCTCTCTTTCCCAAACTTCTGATGATGCCATCTCCTCTGACCATAGCCCAGGAAGCTTTGCCACCCTCCATGGTGGTGGCTCCATCACCGGAAGTGGTGCAATAATAGGACAACCCTCCCTCTCTAACCATTTCAACAACAACAACAATAACCTACCACCACCATCTGATACTACTTCCAACTACTATCTCCTCCAAAGAGAAAACATGAACAATAACCAACCACAATATGGGTTGGTAACACCTTCAAAGAGACCTAGGGGAAGACCATCTGGGTCTAAGAATAAGCCCAAAGCACCTATTATTATCAGACAAGAAAGTGAACATGCTATGAAATCAGTTGTTATTGAAATTCCTATAGGAAAAGATGTAATTGAGGGTCTCATCAACTTTGCACGTCACCACCGTGTTGATATCTCAGTCCTTAGTGGCTCTGGTTCTGTCACTGATATTACCCTTCGTCACCATGTGTCATGTGCATCTGTTTTCCCTATTCATGGAACCTTTCGTATAATATCCTTAACTGGGTCTTATATTGGTGTTCGTTTCCCTTCTTTGGCATCACCTAATCACCCTTCTTTTCCTCCTTGTTCTTCCTTTGGAATCTGTGTTGCAGGGCCTCAGGGACAAGTGTTTGGTGGTGTTATTGGAGGGAGAGTTATGGCTGCTAGTGTTGTGGTTGTGATGGCCATTGTTTTCAAGAAACCTGAGTTTCATAGGCTTTCATTGATCAATGAAAATGTTGTTGATGAAGGTGATGAAGAAGGTGAGAAAGAAAATGATGAGAATAATAATAATATTAATGGGTATGCTGGTATAATTAATGGTGGCCATTCAGGTGGTGCTAACATTGTTCCTAACAGCAACATCAACAACAATGGGATTCTCATGATGCCTAACATGTCTGGTTTTGGTGTTTCTAATTCAGTTGGTCAATTGAATAGGCAAATGCATGTTGCAAACATGAACATGTTGCAGTGGAACCACCTCAATCATCTGCAGTAA 1026 0.4152 MAHNSLVPSLSQTSDDAISSDHSPGSFATLHGGGSITGSGAIIGQPSLSNHFNNNNNNLPPPSDTTSNYYLLQRENMNNNQPQYGLVTPSKRPRGRPSGSKNKPKAPIIIRQESEHAMKSVVIEIPIGKDVIEGLINFARHHRVDISVLSGSGSVTDITLRHHVSCASVFPIHGTFRIISLTGSYIGVRFPSLASPNHPSFPPCSSFGICVAGPQGQVFGGVIGGRVMAASVVVVMAIVFKKPEFHRLSLINENVVDEGDEEGEKENDENNNNINGYAGIINGGHSGGANIVPNSNINNNGILMMPNMSGFGVSNSVGQLNRQMHVANMNMLQWNHLNHLQ* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1243 341 Gene3D - 118 262 - -
Lan2g1243 341 MobiDBLite consensus disorder prediction 80 106 - -
Lan2g1243 341 Pfam Plants and Prokaryotes Conserved (PCC) domain 120 241 IPR005175 -
Lan2g1243 341 MobiDBLite consensus disorder prediction 47 68 - -
Lan2g1243 341 MobiDBLite consensus disorder prediction 1 32 - -
Lan2g1243 341 CDD DUF296 122 225 IPR005175 -
Lan2g1243 341 ProSiteProfiles PPC domain profile profile. 115 262 IPR005175 -
Lan2g1243 341 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 55 287 IPR014476 GO:0003680
Lan2g1243 341 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 55 287 - -
Lan2g1243 341 SUPERFAMILY AF0104/ALDC/Ptd012-like 117 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1243 Lan-Chr2 23465849 23466874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1243 91 292 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 35.023 1.70e-35 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1243 - - lang:109328424 598.201