Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1231 ATGGCTTCTTTACTTGATTCTAATGTTCTTGCTCAACCACAACAACAACAACCTAAAGGTGAGAATAAACAAAAGAATGAAGGAAGAAATAGGAGGGTACTTAAGGACATTGGTAACCTTGTTGTTAAGCAATCAGACCCTATTCCTAATGTCCCTAAGCGCATCACAAGGAACCTTGGTGCTCAATTGTTGCCTAATGCCCAAGCAACAGAGAAAAACAAGAAGCCAAGCACTGATGTGGGAAATTTTGTTGCTGCCACAAAGGTAGAACAAGCTAAAAAGCCAACAGAAGCTGAGGTTATTATCATCAGCTCTGATGATGAAGAGGAAGAAAAAGAGAAGCAAACTGTTAAAGGAGGAAGAAAGGAAATAGAGAGGGTTGCTGTTAGGGGAAAGAATAGCAAGGCCTTTAGTTCAGTCCTATCAGCTAGAAGCAAGGCTGCTTGTGGACTTACTCACAAGCCAAAGGATTTGGTAGAGGACATTGATGTTGCTGACATTGCCAATGAATTGGAAGCAGTGGAGTACCTTGATGACATTTACATGTTCTACAAGCTAACTGAGGATGACGGTCGTGTGCACGATTACATGCCTTCACAGCCAGACATCAACATGAAGATGCGATCAATCCTGGTTGATTGGTTGATAGAAGTGCATCGAAAATTCGAACTCATGCCAGAGACTCTCTATTTAACACTGAATATCATAGACCGATTCCTATCGATGAAGGCTGTACCTAGAAGGGAACTTCAATTAGTTGGTATCAGTTCAATGCTGATAGCATGCAAATATGAGGAGATATGGGCACCAGAGGTTAATGACTTTGTATACATAGCTGATAATGCATATGTTAGAGAACACATTCTGATTATGGAGAAAACAATCTTGAGTAAGCTTGAATGGTATCTAACTGTTCCTACACCTTATGTTTTCCTGATTCGATATATCAAAGCCTCTACTCCCTCTGATAAAGAGATAGAGAACATGGTGTTTTTCCTTGCTGAGCTTAGTTTGATGGATTACTCTGCTATGATCAACTACTGTCCTTCTTTGATTGCTGCTTCTGCTGTGTATGCTGCAAGATGTACCCTTGGAAGGAGCCCTTATTGGACTGAGACTCTGAAACACTACACTGGCTATTGTGAGGAACAACTAAGGGATTGTTCCAAAATCATGGTCAATTTTCATTCTGCTGCTCCAGAAAGCAAGCTTAGGGCTGTGTACAAGAAATTCAGTAACTCGGAGCGTGGCGCTGTTGCTCTTGTTAATCCAGCAAAAAACTTGTTATCATCATCACCACCACCACAGTCTTGA 1314 0.4117 MASLLDSNVLAQPQQQQPKGENKQKNEGRNRRVLKDIGNLVVKQSDPIPNVPKRITRNLGAQLLPNAQATEKNKKPSTDVGNFVAATKVEQAKKPTEAEVIIISSDDEEEEKEKQTVKGGRKEIERVAVRGKNSKAFSSVLSARSKAACGLTHKPKDLVEDIDVADIANELEAVEYLDDIYMFYKLTEDDGRVHDYMPSQPDINMKMRSILVDWLIEVHRKFELMPETLYLTLNIIDRFLSMKAVPRRELQLVGISSMLIACKYEEIWAPEVNDFVYIADNAYVREHILIMEKTILSKLEWYLTVPTPYVFLIRYIKASTPSDKEIENMVFFLAELSLMDYSAMINYCPSLIAASAVYAARCTLGRSPYWTETLKHYTGYCEEQLRDCSKIMVNFHSAAPESKLRAVYKKFSNSERGAVALVNPAKNLLSSSPPPQS* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1231 437 CDD CYCLIN 304 393 IPR013763 -
Lan2g1231 437 PIRSF Cyclin_A_B_D_E 4 437 IPR039361 -
Lan2g1231 437 SMART cyclin_7 310 394 IPR013763 -
Lan2g1231 437 SMART cyclin_7 213 297 IPR013763 -
Lan2g1231 437 Pfam Cyclin, C-terminal domain 306 422 IPR004367 -
Lan2g1231 437 Gene3D - 179 420 - -
Lan2g1231 437 SMART Cyclin_C_2 306 425 IPR004367 -
Lan2g1231 437 CDD CYCLIN 207 296 IPR013763 -
Lan2g1231 437 PANTHER CYCLINS 23 427 IPR039361 -
Lan2g1231 437 MobiDBLite consensus disorder prediction 1 33 - -
Lan2g1231 437 PANTHER CYCLIN-B1-4 23 427 - -
Lan2g1231 437 Pfam Cyclin, N-terminal domain 180 303 IPR006671 -
Lan2g1231 437 SUPERFAMILY Cyclin-like 307 427 IPR036915 -
Lan2g1231 437 ProSitePatterns Cyclins signature. 208 239 IPR006671 -
Lan2g1231 437 Gene3D - 193 304 - -
Lan2g1231 437 MobiDBLite consensus disorder prediction 1 21 - -
Lan2g1231 437 SUPERFAMILY Cyclin-like 169 303 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1231 Lan-Chr2 23394728 23397599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1231 4 422 Core Cell Cycle Gene Families AT2G26760 51.064 2.09e-140 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1231 K21777 - gmx:547782 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1231 2 23394728 23397599 Lan11g0158 11 1014731 1017405 LSH