Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1223 ATGACATTGTGTTTTTGCATTATCATCATGGGAAACTACTGTAATAAACCAGTTGCTCATGTTTCTCCAGCAAGTTTTGTTGGTATAGGAAGTACAAAGTCTCAAAATAAGGCAAAGCAGAATTCAAATTCTTCTGAACTAAAAGCTGATGTGCAAACTTCAGCACCAAATGTTGACAAATCCATCTCCAATAACCTTAAGTCCTTCACCTTCAATGATCTAAAGGAGGCCACGAAGAATTTCCGGCAAGAAAATTTGATCGGGGAGGGAGGGTTTGGGTTTGTTATCAAAGGATGGATAGATGAGAACACCTATGCTCCTACAAAACCAGGGACTGGGATTGTAGTGGCCATTAAGAAGCTTAAGCCAGAAAGCTTTCAAGGCCACAAGCAATGGCTTGCAGAAGTTAATTATCTAGGGAAGCTTCACCATGAAAATCTAGTGAAACTTATTGGTTACTGCTCAGATGGTAAAAATAGGCTTCTAGTTTATGAGTTTATGCAAAAGGGTAGTTTGGAAAATCATTTATTCAGAAAAGGTGTTCAACCCATACCCTGGGTTAGAAGGGTCAATATTGCAATTGATGTTGCAAAAGGAGTAGCATTCTTACATGCCCTTGATGCAAATGTTATCTACCGTGATTTAAAGGCTTCTAACATCCTACTCGATCCGGATTTCAATGCAAAGCTTTCGGATTTCGGGTTGGCAAGAGATGGTCCTACTGGAGATAACACTCATGTTTCAACCACAGTTATTGGAACTCATGGTTATGCTGCACCAGAATATGTAGCTACAGGCCATTTGACCCCGAAGAGTGATGTATACAGTTTCGGTGTTGTCTTGTTAGAGTTACTAACCGGAAGGCGTGTGGTTGAAGATGAGAGAATTGGATTTTCAGAAAAAACACTGGTGGATTGGGCATGGCCTTTCCTGAGTGATACTAGAAGAATTTTGAGAATCATGGATGCTAGATTAGGTGGTCAATATTCCAAGAAAGGAGCTCAAGCTGTAGCTGCACTTACATTGCAATGCCTTGATATTGATCCGAAACTTAGACCATCAATGGTAAATGTTGTTGCTGCATTGGAAGCACTCGGTTCGTCGAATTCAATCCCAAGGACCCCGAAATGTGAGAATCATGCAACCAAGCATTCTAGTCATTCTCAAAAGTCAGCTGGAAATTCCAACATACTATGA 1197 0.4052 MTLCFCIIIMGNYCNKPVAHVSPASFVGIGSTKSQNKAKQNSNSSELKADVQTSAPNVDKSISNNLKSFTFNDLKEATKNFRQENLIGEGGFGFVIKGWIDENTYAPTKPGTGIVVAIKKLKPESFQGHKQWLAEVNYLGKLHHENLVKLIGYCSDGKNRLLVYEFMQKGSLENHLFRKGVQPIPWVRRVNIAIDVAKGVAFLHALDANVIYRDLKASNILLDPDFNAKLSDFGLARDGPTGDNTHVSTTVIGTHGYAAPEYVATGHLTPKSDVYSFGVVLLELLTGRRVVEDERIGFSEKTLVDWAWPFLSDTRRILRIMDARLGGQYSKKGAQAVAALTLQCLDIDPKLRPSMVNVVAALEALGSSNSIPRTPKCENHATKHSSHSQKSAGNSNIL* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1223 398 MobiDBLite consensus disorder prediction 371 398 - -
Lan2g1223 398 SUPERFAMILY Protein kinase-like (PK-like) 59 363 IPR011009 -
Lan2g1223 398 CDD STKc_IRAK 87 365 - -
Lan2g1223 398 Gene3D Phosphorylase Kinase; domain 1 55 166 - -
Lan2g1223 398 PANTHER TYROSINE KINASE FAMILY PROTEIN 29 387 - -
Lan2g1223 398 ProSitePatterns Protein kinases ATP-binding region signature. 87 120 IPR017441 GO:0005524
Lan2g1223 398 Pfam Protein tyrosine and serine/threonine kinase 84 361 IPR001245 GO:0004672|GO:0006468
Lan2g1223 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Lan2g1223 398 PANTHER OS01G0588500 PROTEIN-RELATED 29 387 - -
Lan2g1223 398 MobiDBLite consensus disorder prediction 33 53 - -
Lan2g1223 398 ProSiteProfiles Protein kinase domain profile. 81 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1223 398 SMART serkin_6 81 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1223 398 Gene3D Transferase(Phosphotransferase) domain 1 167 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1223 Lan-Chr2 23341162 23353406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1223 59 368 Glycoside Hydrolase AT3G07070 50.794 1.15e-100 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan2g1223 PK_Tyr_Ser-Thr 4.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1223 - - gmx:102664409 645.195