Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1197 ATGTCTGATGACATGCTGATACATTTCTCTTCAAACTCTTCTAACCAATCGGATCAGTCTCTGCCTACAAAGATTGCAAAGCTGGAAGCTCGAATGGTGGGAAAGGGTTCTTCCAATGTTTCTCATCAGTCAACTTGGACCACTCTTCCTTCTCCAGCTGGGAAATTTCTAGGAGCTGCTGAGGTTTTGGTTGAACCATCTACTTCTAGTGATTCTGATGATGACGTGAGTTTGAATGGTGGGGAATTCTTAATACAAGCCAACACAGCGAAGCGCCTAAAACGTGAAGAACATGCTGACTCTAATGTTTTTGAGCGTGTTGAGGTTGTTACTGATGGAAGACAAATTAGTTTGGAGGCTGCGGAGACAAAAGCTAATGTTGATGTGAATAGAAAAAAACCTGGTCGTGGAAGAGGCGGTTCTGGTTCAAGCAGAGGCCGCGGTTCCCGAGTTAATGATCAGACCAGAACTCAGATTCCTCCTCCAGCTGTTTTGGCTTCAAATGGTCAGATTGATAATGATGGAAGACTCAAAGGTCGGTTTCTTAGTGATAATTATGCTTCATTAGAGGTGGAAGTTGCATCTTTACGTGCTAAAGTTGTTGCATTGGAGGAGGACTTGCGTAAATCCAAACAAGAGAACTCTGATTATCAGAACCTTTCTCGACAGTTAGAAACGGAACTGAAAGGCGTAACAGATCATGAACAACAAATGAAGCCTAAGAGAACGAAGATAATATCTGATTTGCTGATATCAGTTTCAAAGGCTGAGAGACAAGAGACAAGGCTAAAAGTACGACAAGATTCATTGAGACTTGGAAATGTTGGTGTAATCAGAGCTGGAACAGTCATATCTGAGACCTGGGAAGATGGTCAAGCATTGAAGGATCTGAATGCCCAGCTTAGACAACTAATAGAAACGAAAGAGGCAATTGAACGGCAGCGCAAATTATTTAAGAAAAAACAACCCGATAAGGGTGATGGAACAGATGCAGAGGCTGTATTAGCAGAAGATGTTCTCATTCACGATGAAATCTACAAGTCTCGACTAGCTAGTATTAAACGGGAAGAAGAAACTATTCTGCGGGAGAGGGATCGTTATGAACTAGAGAAGGGGAAATTGACAAGGGAAATGAAACGCATACGGGATGAGGATGGTTCACGGTTTAACAACTTTCAGATTCTTAATCATCGTTATGCCCTTCTAAACCTTCTTGGAAAGGGAGGATTCAGTGAGGTTTACAAGGCTTTTGACTTGGTGGAGCATAGATATGTTGCTTGCAAGCTTCATGGTTTAAATGCTCAATGGAGTGAAGAGAAGAAACAAAGTTACATTCGACATGCAATTCGAGAATACAATATTCACAAGACCCTTATACATCATCACATCGTTCGTTTATGGGACATCTTTGAGATTGATCACAATACATTCTGCACTGTTCTAGAGTACTGCAGTGGGAAGGATCTTGATGCTGTCCTTAAAGCAACACCTATATTACCTGAGAGGGAGGCGAGAGTAATTCTAGTTCAGGTTTTTCAAGGTCTTGTTTACATGAATAAAAGGACTCAGAAGATTATCCATTATGATTTAAAGCCTGGAAACGTTCTGTTTGACGAGCTTGGTGTTGCCAAAGTGACTGATTTTGGTCTTAGTAAGATAGTGGAGGATGATGTGGGATCCCAGGGTATGGAACTTACATCTCAGGGTGCTGGAACATATTGGTATTTGCCTCCTGAATGCTTTGAGCTTAGCAAGACACCTCTTATATCATCAAAGGTTGATGTCTGGTCTGCTGGTATTTTGTTCTATCAAATGCTCTTTGGACGACGTCCTTTTGGGCACGACCAATCACAAGAGAGAATACTTCGTGAAGACACAATCATTAAGGCACGCCGAGTTGAATTTCCTTCTAGGCCTACTGTTTCCAATGAGGCAAAGGATTTGATTCGGCGGTGTCTGACATATAATCAGGCTGACAGACCAGATGTATTAACCATTGCTCAAGATCCATATCTCACTTACTCAAAGAAGTAA 2034 0.4169 MSDDMLIHFSSNSSNQSDQSLPTKIAKLEARMVGKGSSNVSHQSTWTTLPSPAGKFLGAAEVLVEPSTSSDSDDDVSLNGGEFLIQANTAKRLKREEHADSNVFERVEVVTDGRQISLEAAETKANVDVNRKKPGRGRGGSGSSRGRGSRVNDQTRTQIPPPAVLASNGQIDNDGRLKGRFLSDNYASLEVEVASLRAKVVALEEDLRKSKQENSDYQNLSRQLETELKGVTDHEQQMKPKRTKIISDLLISVSKAERQETRLKVRQDSLRLGNVGVIRAGTVISETWEDGQALKDLNAQLRQLIETKEAIERQRKLFKKKQPDKGDGTDAEAVLAEDVLIHDEIYKSRLASIKREEETILRERDRYELEKGKLTREMKRIRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKAFDLVEHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLIHHHIVRLWDIFEIDHNTFCTVLEYCSGKDLDAVLKATPILPEREARVILVQVFQGLVYMNKRTQKIIHYDLKPGNVLFDELGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQSQERILREDTIIKARRVEFPSRPTVSNEAKDLIRRCLTYNQADRPDVLTIAQDPYLTYSKK* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1197 677 Coils Coil 294 321 - -
Lan2g1197 677 CDD STKc_TLK 398 671 - -
Lan2g1197 677 MobiDBLite consensus disorder prediction 121 171 - -
Lan2g1197 677 PANTHER MIXED LINEAGE PROTEIN KINASE 1 677 - -
Lan2g1197 677 MobiDBLite consensus disorder prediction 145 164 - -
Lan2g1197 677 Coils Coil 350 384 - -
Lan2g1197 677 Gene3D Transferase(Phosphotransferase) domain 1 390 677 - -
Lan2g1197 677 ProSiteProfiles Protein kinase domain profile. 399 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1197 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 525 537 IPR008271 GO:0004672|GO:0006468
Lan2g1197 677 ProSitePatterns Protein kinases ATP-binding region signature. 405 428 IPR017441 GO:0005524
Lan2g1197 677 SUPERFAMILY Protein kinase-like (PK-like) 391 673 IPR011009 -
Lan2g1197 677 MobiDBLite consensus disorder prediction 1 21 - -
Lan2g1197 677 PANTHER BNAC09G36930D PROTEIN 1 677 - -
Lan2g1197 677 Pfam Protein kinase domain 400 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1197 677 Coils Coil 186 227 - -
Lan2g1197 677 SMART serkin_6 399 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1197 Lan-Chr2 23123569 23133689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1197 382 677 MAP Kinase Kinase Kinase AT3G13530 27.425 8.16e-27 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Lan2g1197 Pkinase 3.1e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1197 K08864 - gmx:100805168 1125.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1197 2 23123569 23133689 Lan2g1197 2 23123569 23133689 ECH
Lan2g1197 2 23123569 23133689 Lan11g0189 11 1186514 1195972 LSH