Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1188 ATGATGGCACCTACAATCTTTTGCACCATAATCTCCCTTCTTCTTCTACCCTTTCTCATTTCACAAACACATTCCCAACAACAATACTTAAACAACAAACAACTCAAATGTGAAGACACAACTAACTCCACTTATGGCAATATCTGCAATAGTAACCCTTCTTGTCAATCTTACCTCACTTTCATATCATCTTCTCCATTCTACAACACCCCTTCTTCCATTTCCTACCTTCTCAATTCAACACCTTCTCTCATAGCTCAATCCAACAACATCACTGATGTTAATCCTATACCCACCAACACTATTATATCTGTTCCTGTTAACTGTTCTTGCTTCAATAACCTATATCAACACAACACTACATATACTTTGAAGACTCTAGGTGAAACTTATTTCAGTATTGCTAATAATACTTATCAGGCTCTTACAACATGTCAAGCTCTTATGGCACAGAATATATATGAGGCAACGAATCTCACTGCTGGTCTCAACTTGCATGTGCCATTAAGGTGTGCTTGTCCTACAAAGAAACAGCTTGATGAAGGGTTCAAGTACTTGCTTACTTACCTTGTATCTGAAGGTGAATCTGTTTCTTCCATTGCTGAGATTTTTGGTGTTGATGAACAAAGTGTTTTGGATGCTAATGAGCTTTCTCCTGGTTCTATTGTTTTCTTCTTTACACCTCTTTTGGTTCCTCTTAAGCAAGAACCACCGGCAAAGTTACAAATTTTGACATCTTCGCCGCAGCCTCAGCCGCAGCCGCCTCCTCCTCCATCTCCGGAAGGGGGTGGTGGTGGTTCTTCAAGTTCTTCTACGAAATGGGTTATTGTTGGTGTAGTTATTGGTGTTGTTGTTCTTGTGATCCTCCTTGTATTTTTGTTCTGTTTTTACCGGCGCCGCCGTGAGCCGCCGCTACCGGTGGTGGAAAGTACTAAGATTTTGTCGGATTCTACCACCACTGAAGGCACCAAGAAAGTGTCAGAAACCACATCCACTTCAGAATCATGGTCTCTCTCATCTGAAGGAATTCGCTATGCTGTTGAGTCTTTGACACTGTACAAGTTTGAGGAGTTGGAAAAGGCCACAGGGTCATTCAGTGAAGAAAACAGGATCAAGGGTTCTGTTTATAGAGCTTCTTTCAAGGGTGATGATGCTGCTGTAAAGATTCTAAAAGGGGATGTTTCTGGCGAAATCAACATTCTGAAGAAGATAAACCACACAAACATTATAAGGTTGTCTGGTTTTTGTGTCTACAAAGGTAACACCTATCTTGTTTATGAGTTTTCTGAGAATGATTCTCTTGATGATTGGCTCCACACTATGGATAAGAAATACAAGAATTCTTTGTCTTTGAGTTGGATTCAAAGAGTTCAGATTGCTCATGATATTGCTGATGCACTTAATTACCTTCATAATTATGTTACCCCTCCTCATGTTCATAAGAATTTGAAGAGTGGTAATGTTCTTTTAGATGGAAATTTTAGAGCTAAAGTTTCAAACTTTGGGTTAGCTAGAGTAGTGGAAGATCAAGGAGAAGAAGGGGGGTTTCAGTTAACAAGACATGTGGTAGGTACACAAGGTTACATGGCACCTGAGTATATAGAAAATGGTATGATAACACCAAAAATGGATGTTTTTGCATTTGGTGTTGTGGTTTTGGAATTGCTTTCAGGAAAAGAAGCTGTTATATCAGGAGAACAGTTTCTATCAGCAACTATAAATCAAGTACTTGAAGGAGACAATGTTAGAGAGAAACTTAGAGGTTTCATTGATCCAAGTTTGAAGGGTGAATACCCTTTGGATCTGGCATATTCATTGGCAGTGATGGCCAAAAAATGTGTTGGTCGTGACCTTAATTCAAGACCAAACATTTCTGAAGTTCTCATGACTTTGTCTAAGATTCAATCCTCTATGTTAGATTGGGATCCATCTGATGAGTTTGAACGGTCCAGATCTGTTAGCTAAATGTTTGACAGCAGATAG 1983 0.3938 MMAPTIFCTIISLLLLPFLISQTHSQQQYLNNKQLKCEDTTNSTYGNICNSNPSCQSYLTFISSSPFYNTPSSISYLLNSTPSLIAQSNNITDVNPIPTNTIISVPVNCSCFNNLYQHNTTYTLKTLGETYFSIANNTYQALTTCQALMAQNIYEATNLTAGLNLHVPLRCACPTKKQLDEGFKYLLTYLVSEGESVSSIAEIFGVDEQSVLDANELSPGSIVFFFTPLLVPLKQEPPAKLQILTSSPQPQPQPPPPPSPEGGGGGSSSSSTKWVIVGVVIGVVVLVILLVFLFCFYRRRREPPLPVVESTKILSDSTTTEGTKKVSETTSTSESWSLSSEGIRYAVESLTLYKFEELEKATGSFSEENRIKGSVYRASFKGDDAAVKILKGDVSGEINILKKINHTNIIRLSGFCVYKGNTYLVYEFSENDSLDDWLHTMDKKYKNSLSLSWIQRVQIAHDIADALNYLHNYVTPPHVHKNLKSGNVLLDGNFRAKVSNFGLARVVEDQGEEGGFQLTRHVVGTQGYMAPEYIENGMITPKMDVFAFGVVVLELLSGKEAVISGEQFLSATINQVLEGDNVREKLRGFIDPSLKGEYPLDLAYSLAVMAKKCVGRDLNSRPNISEVLMTLSKIQSSMLDWDPSDEFERSRSVS*MFDSR* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1188 659 PANTHER PROTEIN LYK5 15 650 - -
Lan2g1188 659 MobiDBLite consensus disorder prediction 244 267 - -
Lan2g1188 659 Pfam LysM domain 189 221 IPR018392 -
Lan2g1188 659 CDD LysM 188 224 IPR018392 -
Lan2g1188 659 ProSiteProfiles Protein kinase domain profile. 308 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1188 659 SUPERFAMILY Protein kinase-like (PK-like) 338 629 IPR011009 -
Lan2g1188 659 SMART LysM_2 188 232 IPR018392 -
Lan2g1188 659 SMART LysM_2 121 168 IPR018392 -
Lan2g1188 659 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 15 650 - -
Lan2g1188 659 Gene3D LysM domain 184 241 IPR036779 -
Lan2g1188 659 Pfam Protein kinase domain 392 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1188 659 ProSiteProfiles LysM domain profile. 187 231 IPR018392 -
Lan2g1188 659 Gene3D Phosphorylase Kinase; domain 1 324 428 - -
Lan2g1188 659 Gene3D Transferase(Phosphotransferase) domain 1 430 649 - -
Lan2g1188 659 MobiDBLite consensus disorder prediction 248 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1188 Lan-Chr2 23049665 23051933 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1188 1 653 Receptor kinase-like Gene Family AT2G33580 54.118 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lan2g1188 Pkinase 5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1188 - - gmx:100818534 852.818