Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1176 ATGATTTCACAACTCAACCACAATCTAATCTTTCTTTTCCATCTTCCTATTCACAAAAAATCTGTTTTTCCACCAACCCCACTTTCTCTTTCTCTCAAAGTTTCAACCTTTATCGATTCTAACACTACCCATCTTCATTTTCCTCTTTTTTCTGCTCTCAATTCCACTCATTCATGTCCTTCTCCAAAACGCGTGTCTCATATTGTAAAAAATGAAGGTCAACGTGTGTTAATGGATTACCTTTACTTAACAAGGGGTTACAATTATTTAGATGCTGAATACATTAGCAAAAATTCTCCACGTTTTATTCAAGGTTTAGTGTCAAAGATTAATGTTCATGATGATGATGATGATGTTGCTAAAGAGTTAATGAAGTTTTTGAGGTACAACCCTATTAATGAGTTTGAACCATTTTTTGAGAGTTTGGGTGTTAACCTATCTGAATTGCATTTATTTCTCCCTAGTGGCATAATGTTCTTGGATGATGATCATGTTTTGCTTGAGACTTTTCATACTTTGAGTAGTTATGGAATTCCGCGAAATAAAATAGGGAAAATTTATAAGGAAGCTAAGGAGATTTTTGGGTATGCTAGTGGATTGTTATTGAAATTTCAAGGTTATGAAGATTTGGGTTTGAGTAGATCAACTATTATAAAGCTTGTTGTTTGTTGCCCTTCACTTTTGGTGGGTGATATCAATAGCGAATTCGTTGCTGTTCTTGACCAGTTGAAGAATATTGGGATTGGAAATGATTGGATTGTGAACTACATGTCTTGTTCAAGAACATATAGTTGGAAAACGATGATTGATACAATGCAGTTTCTCCGTGAAGTAGGCTATTCGGAGAAACAGATGCACGATTTGTTTAAGGAAAATCCGAAGTTTTTATTGGAGGGTTTCGGGAAGGTGCTATACACTTTTTTGGATCGATCAGTCGAGCTTGGTATAGAGATGAATGTGATTTATTCTTATTTCACAGAGTATCCTCATATATTGTCAAACAAGTATGCGAAAAATCTGTTAGAAGTGGTTGATTTTTTGTGTTTCATTGGAATGGGAAGAGATGACATTGTACACATTTTGTCAAACTACATGCATCTCCTGAGCACACGTTCCTTAAAAGGTCCTAGAACTGTTTGCAAGGAGTTAAAAGTTGAAAAGGCTGATTTATGCCGAATCATTAAGGATGATCCACTAAAACTAATTAGTGTCGGTTCAAAATTGGAAAAGAAGAGCTCTGGAAAGATATCTGGTCATGACCCACGTATATATTTGCAAAAAATAAATTTCTTGCAGAAACTTGGGTATGCCGAGAACACTGAGGAGATGGCAAAAGCTTTGAAAAGGTTCAGAGGGAGAGGTGATCAATTACAGGAGAGGTTTGACTGCTTGGTGGCAGCTGGTTTAGATTATAACAGTGTGGTTGAAATGGTAAAACGAGCTCCTATGATACTAAACCAGAAGAAGGCTGTAATTGAAAAGAAGATTGATTTCTTAAGAAATATTTTAGGTTGCCCAGTAGAATGTGTCGTGGGATTCCCGTCATATTTCTGCCATAATTTGGAGAAAAATATTGAAAGATTTTCAATGTATGCGTGGCTAAAGGAGAGGAATGCAGTAAATCCTGCATTTGCCTTGAGCAACATAGTTTCAGCAAATGATAAACGGTTTGTAAAGTACTTTGTGGATGTTCATCCTGAAGGTCCAACCATATGGAAAGTCCTTCCTATAGGCACATGCAGTTGCTATCCTTCTGTCTCACTTCAATTAGGTGAATTGCTTTTTTGTAAGAAGACATTGTCAAAGCTTATTAGAGACTGGATGGTCTGGGTTTCGTCAAGGAGAGACCACTTGGTTGGCCTCTGCTGTTTGTTTGATTTGGAGGGCAAGGAAACTCCGAGGTCTTCAACAATGAAAACCTTAATAAGGATATGGTGA 1938 0.3679 MISQLNHNLIFLFHLPIHKKSVFPPTPLSLSLKVSTFIDSNTTHLHFPLFSALNSTHSCPSPKRVSHIVKNEGQRVLMDYLYLTRGYNYLDAEYISKNSPRFIQGLVSKINVHDDDDDVAKELMKFLRYNPINEFEPFFESLGVNLSELHLFLPSGIMFLDDDHVLLETFHTLSSYGIPRNKIGKIYKEAKEIFGYASGLLLKFQGYEDLGLSRSTIIKLVVCCPSLLVGDINSEFVAVLDQLKNIGIGNDWIVNYMSCSRTYSWKTMIDTMQFLREVGYSEKQMHDLFKENPKFLLEGFGKVLYTFLDRSVELGIEMNVIYSYFTEYPHILSNKYAKNLLEVVDFLCFIGMGRDDIVHILSNYMHLLSTRSLKGPRTVCKELKVEKADLCRIIKDDPLKLISVGSKLEKKSSGKISGHDPRIYLQKINFLQKLGYAENTEEMAKALKRFRGRGDQLQERFDCLVAAGLDYNSVVEMVKRAPMILNQKKAVIEKKIDFLRNILGCPVECVVGFPSYFCHNLEKNIERFSMYAWLKERNAVNPAFALSNIVSANDKRFVKYFVDVHPEGPTIWKVLPIGTCSCYPSVSLQLGELLFCKKTLSKLIRDWMVWVSSRRDHLVGLCCLFDLEGKETPRSSTMKTLIRIW* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1176 645 Pfam mTERF 272 439 IPR003690 GO:0003690|GO:0006355
Lan2g1176 645 Pfam mTERF 426 557 IPR003690 GO:0003690|GO:0006355
Lan2g1176 645 Gene3D Transcription termination factor 3, mitochondrial 138 305 IPR038538 -
Lan2g1176 645 Gene3D Transcription termination factor 3, mitochondrial 306 568 IPR038538 -
Lan2g1176 645 PANTHER CGI-12 PROTEIN-RELATED 42 577 IPR003690 GO:0003690|GO:0006355
Lan2g1176 645 SMART mt_12 507 540 IPR003690 GO:0003690|GO:0006355
Lan2g1176 645 SMART mt_12 322 353 IPR003690 GO:0003690|GO:0006355
Lan2g1176 645 SMART mt_12 218 249 IPR003690 GO:0003690|GO:0006355
Lan2g1176 645 SMART mt_12 475 506 IPR003690 GO:0003690|GO:0006355
Lan2g1176 645 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 42 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1176 Lan-Chr2 22927644 22931306 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lan2g1176 mTERF 4.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1176 - - lang:109340661 1310.82