Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1175 ATGATTTCAAACCATCTCTTTCTTATATCCCCTATCATATATCAAACACAAAACCCATCTTCTGTTTTTCTCAAAGTTCCAACCTTTCTTACTTCTAACACTACCCATGTTGTTAAAGCCTCTTCCTTTCCTTCAATTCATTCATCAAATTCCAATTCTAAAAAACGGTTATCTCGTATTGCAACGGTTGAAGCTCAGAATGTTCTTCTAGATTACCTACACTCTACACGTGGTTACACTTTCATGGATGCTGAGTACATTAGTAAGAATTCACCACATTTTGTTCAACTTCTTTTGTCACAGTTGGAACACCATGATGTTGATAATGATGTTGGTGTTGCTGGTTGTTTAAGAAAGTTCTTATGGTACAATCCAATTAATGAGTTTGAACCATTTCTTGAGAGTTTGGGGATTATACCAGCTCAGTTACCTTTGTTTCTACCTCATGGAATGATGTACTTGTCAGATGATTATTTGTTGCTTGAAAACTTTCATGCTTTGAGGAATTATGGGATTCCAAGGAACAGAATAGGGGTCATTTATATGGATGCAAAAGATGTTTTTGGATATCCCAATGGATTGTTGTTATCGAAAATTTTCGCTTACGAAAGTTTGGGGTTGAGTAGATCTATGGTTATCAAGCTTGTTGTTTGTTGCCCTTCACTTTTGGTTGGTGATATGAGCAATGAATTAGTCATTGTTCTTGATTGGTTGAAGAAAATTGGGATTGGAAATGATTGGATTGAGAATTACTTGTGTGGGAATTACTTGACTTGTTCAAAAACATATAGCTCAAAAGGAATGCTTGATGCTATGCAATTCCTTCATAAAGTAGGCTATTCTGAGAAACAGATGCATGATTTGTTTAAGGCAAATCCTACATTGTTATTGGAAGGTTTTGGGAATGTGTACATATTTTTGGGTCTATCACTTAAGTTGGGTCTCAAGATAAATGTGATTTATTCTTCTTTTATAGAATATCCCCATATCTTGTCGAATAAGTGCGCAAGAAATCTGTTAAGAGTGTTTGCCTTTTTGCGTTTTATTGGAATTGGAAAAGATGACATTGCATGCATTTTGGCTAACCACATGCATATTCTGAGTTGCTATCCTGTGAAAGGTCCTAAAACTGTTTGTCGGCAGTTAAAAGTTGCGAGAGCTGATTTATGCCAAACCATAAAGGATGATCCATTCAAGCTGATTAGTTTGGCTTCAAAGTTGAAACAGAAGAATGCTGAATACTTATCTCCTTATGACCCTAGTATTCATTTGGACAAAACAATATTCTTGAGGAAACTAGGATATGCAGAGAACTCTGAGGAGATGGCGAAGGCATTAAAAAGGTTCCGAGGGAGAGGTGATCAACTACAGGAGAGGTTTGATTGCCTGGTAGAAGCTGGCGTGGACTATAACGCTGCAATTGGAATGATAAAACGTGTTCCTACGATTCTAAACCAGAGCAAAATCGTTATTGAAAAGAAGATCGATTTCTTAAGAAACACTTTAGGTTACCCATTAGAATCTATGGTGGCATTTCCAGTGTACTTATGTTACGATTTGGATAGAATTATGCGCAGATTTTCTATGTATGTGTGGGTAAAGGACAAGAATGCAGCAAAACCTATGTTGTCCTTGAGCACCATTCTTACATCCTCCGATGAACGCTTTGTAAAATACTTCGTTAATGTGCATCCTGAAGGTCCAATCATCTGGGAAGTGCTGAAGAGGTTGTCACATGAAGATAAGAGCTAA 1752 0.3687 MISNHLFLISPIIYQTQNPSSVFLKVPTFLTSNTTHVVKASSFPSIHSSNSNSKKRLSRIATVEAQNVLLDYLHSTRGYTFMDAEYISKNSPHFVQLLLSQLEHHDVDNDVGVAGCLRKFLWYNPINEFEPFLESLGIIPAQLPLFLPHGMMYLSDDYLLLENFHALRNYGIPRNRIGVIYMDAKDVFGYPNGLLLSKIFAYESLGLSRSMVIKLVVCCPSLLVGDMSNELVIVLDWLKKIGIGNDWIENYLCGNYLTCSKTYSSKGMLDAMQFLHKVGYSEKQMHDLFKANPTLLLEGFGNVYIFLGLSLKLGLKINVIYSSFIEYPHILSNKCARNLLRVFAFLRFIGIGKDDIACILANHMHILSCYPVKGPKTVCRQLKVARADLCQTIKDDPFKLISLASKLKQKNAEYLSPYDPSIHLDKTIFLRKLGYAENSEEMAKALKRFRGRGDQLQERFDCLVEAGVDYNAAIGMIKRVPTILNQSKIVIEKKIDFLRNTLGYPLESMVAFPVYLCYDLDRIMRRFSMYVWVKDKNAAKPMLSLSTILTSSDERFVKYFVNVHPEGPIIWEVLKRLSHEDKS* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1175 583 Pfam mTERF 323 556 IPR003690 GO:0003690|GO:0006355
Lan2g1175 583 Pfam mTERF 195 296 IPR003690 GO:0003690|GO:0006355
Lan2g1175 583 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 28 575 - -
Lan2g1175 583 SMART mt_12 474 505 IPR003690 GO:0003690|GO:0006355
Lan2g1175 583 SMART mt_12 506 537 IPR003690 GO:0003690|GO:0006355
Lan2g1175 583 SMART mt_12 322 352 IPR003690 GO:0003690|GO:0006355
Lan2g1175 583 SMART mt_12 213 244 IPR003690 GO:0003690|GO:0006355
Lan2g1175 583 Gene3D Transcription termination factor 3, mitochondrial 302 572 IPR038538 -
Lan2g1175 583 Gene3D Transcription termination factor 3, mitochondrial 87 301 IPR038538 -
Lan2g1175 583 PANTHER CGI-12 PROTEIN-RELATED 28 575 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1175 Lan-Chr2 22923782 22926236 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lan2g1175 mTERF 5.9e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1175 - - gmx:100803162 696.812