Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1160 ATGGAGAACCAAACCTTGACTTCAAAAAACTTCTTTTACCAAAACCCTCATCACATTTTACACCATTTCTCTCACAACACTATGGAGAGACACAAATGGATGATTAAGTCCAAAAACCACAACCCCTTTCATTTTTCATGCTTGTTTTTCTTTGTTCTGTGTTTGCTCCTTCTTATACTCCCAATGAAGCCAGTGTTGGGTGAAGAGCATTGGGATGGTGTGATTGTAACACAGTCAAATTTCTTAGCACTTCAAGCCTTCAAGCAAGAGTTGGTTGATCCAAAAGGCTTCTTGAGAAGCTGGAATGACAGTAGCTATGGAGTTTGTAATGGAAGTTGGGTTGGAATCAAGTGTGCTCAAGGACAAGTCATTGTAATCCAGCTTCCTTGGAAAGGGTTAAGGGGCCATATAACTAATAGGATTGGCCAGCTTCAAGGGCTTAGAAAGCTTAGTCTTCATGATAACCAAATTGGTGGTTCAATCCCTATTGCATTAGGACTTCTTCCCAATCTAAGAGGGGTTCAACTATTCAACAACATGTTCATTGGTTCAATCCCTTCTTCCTTAGGTTTCTGTCCTTTACTTCAGTCCTTAGACTTAAGTAACAACTTGCTCACAGGTACAATCCCTCATAGCCTTGGCAATTCTACTAAGCTTTATTTGCTTAACTTGAGCTTCAATTCATTGTCTGGTTCACTACCATCTAGTTTAACACACTCAGCTTCTATCACATTCCTTTCTCTTCAACACAATAATCTTTCTGGCTCTATTCCTAACTCATGGAGTGGTAACCAACTCAGAGAGATTTCTCTTAGTCATAACCAGTTTAGTGGAGCTATACCAAATGAAATAGGAAGACTTTCTAGGCTTAAGACAATAGATTTTTCTAATAATGCCTTGAATGGGAGCTTGCCTGAAACTCTCTCTAATTTATCCTCACTCACTCTATTGAATGTAGAGAACAACCATCTTGGCAATCAAATACCAGAAGCTTTAGGCAGATTACACAACCTTTCTGTTCTGATTTTGAGCAGAAACCAATTTAGTAGCCATGTTCCTCAGAGTATTGGAAACATTTCCACACTTATACAACTTGATTTGTCACAGAATAATCTCAGTGGAGAAATTCCGGTCTCTTTCGATAATTTGAGTAGTATGAATCTCTTCAATGTTTCTTATAACAACCTCTCTGGTCCAGTCCCCACCCTACTTGCCAAGAAATTTAACTCAAGCTCATTTGTAGGAAATATTCAACTATGTGGTTATAGCCCTTCAACTCCATGCCCTTTAGAAACTCCTTCTGAAGGACAAGGAATCCTAGCTCCACCTGCTGAAAAATCAAAACATCACCATCATAAGAAACTAGGTACCAAAGACATTATTCTCATAGCAGCAGGAGTACTACTTGCAGTCCTTATAATACTATGCTGCATCCTGATCTTCTGCCTGTCCAGAAGAAGATCAACATCAAATGCTGAGAGTGGCCAGGCCACAGGGAGAGCTGCTGCTGCTGCCAGGACTCAAAAGGGAGTCCCTCCGGCTGCGGGTGAAGTTGAAGCGGGTGGCGACGACAACGGAGGGAAACTAGTCCATTTTGACGGACCATTGGCTTTTACAGCTAATGATCTCTTGTGTGCAACAGCAGAGATAATGGGAAAGAGCACTTATGGAACTGTGTATAAGGCTACATTAGAAGATGGAAGTCAAGCTGCAGTGAAAAGATTGAGGGAAAAGATCACTAAAGGCCAGAAAGAATTCGAATCTGAAGTTAGTGTCATCGGTAGAATTCGACACCCAAATCTTTTGGCATTGAGAGCCTATTACTTGGGACCGAAAGGAGAAAAGCTTCTGGTTTTCGATTACATGCCAAAAGGAAGCCTTGCTTCTTTCCTACATACTGGTGGGTCTGAAACTAGCATTGATTGGCCGACAAGGATGAAAATAGCACAGGACATAGCTCGTGGCTTGTTTTACCTTCACTCCAATGAAAACATAGTACATGGGAACCTTACATCCAGCAATGTTTTGCTTGATGATAGTACAAATGCAAAAATCGCTGATTTTGGTCTGTCTCGGTTGATGACAACTGCTGCAAATTCTAATGTGATTGCAACTGCTGGAGCCTTAGGATACCGAGCACCCGAACTCTCGAAGCTGAAGAAAGCAAACACAAAAACTGATGTATACAGTCTTGGTGTTATCTTGTTAGAACTCCTAACGGGGAAGCCACCTGGCGAGGCATTGAACGGTGTGGATTTACCTCAGTGGGTTGCCTCCATTGTCAAAGAGGAGTGGACAAATGAGGTTTTCGATGCGGAATTGATGAGAGATGCATCAACAAATGGCGATGAATTGCTAAACATGTTGAAGCTTGCTTTGCACTGTGTTGATCCTTCTCCATCAACACGACCCGAGGCTCACCAAGTTCTACAGCAGCTAGAAGAGATTAGACCAGAGATAGATGTATCAGCCAGTTCTGGTGATGATTTTGCTATACCTTCAACCAGTGAATAA 2514 0.4165 MENQTLTSKNFFYQNPHHILHHFSHNTMERHKWMIKSKNHNPFHFSCLFFFVLCLLLLILPMKPVLGEEHWDGVIVTQSNFLALQAFKQELVDPKGFLRSWNDSSYGVCNGSWVGIKCAQGQVIVIQLPWKGLRGHITNRIGQLQGLRKLSLHDNQIGGSIPIALGLLPNLRGVQLFNNMFIGSIPSSLGFCPLLQSLDLSNNLLTGTIPHSLGNSTKLYLLNLSFNSLSGSLPSSLTHSASITFLSLQHNNLSGSIPNSWSGNQLREISLSHNQFSGAIPNEIGRLSRLKTIDFSNNALNGSLPETLSNLSSLTLLNVENNHLGNQIPEALGRLHNLSVLILSRNQFSSHVPQSIGNISTLIQLDLSQNNLSGEIPVSFDNLSSMNLFNVSYNNLSGPVPTLLAKKFNSSSFVGNIQLCGYSPSTPCPLETPSEGQGILAPPAEKSKHHHHKKLGTKDIILIAAGVLLAVLIILCCILIFCLSRRRSTSNAESGQATGRAAAAARTQKGVPPAAGEVEAGGDDNGGKLVHFDGPLAFTANDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKGQKEFESEVSVIGRIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHTGGSETSIDWPTRMKIAQDIARGLFYLHSNENIVHGNLTSSNVLLDDSTNAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTGKPPGEALNGVDLPQWVASIVKEEWTNEVFDAELMRDASTNGDELLNMLKLALHCVDPSPSTRPEAHQVLQQLEEIRPEIDVSASSGDDFAIPSTSE* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1160 837 PRINTS Leucine-rich repeat signature 195 208 - -
Lan2g1160 837 PRINTS Leucine-rich repeat signature 359 372 - -
Lan2g1160 837 SUPERFAMILY Protein kinase-like (PK-like) 549 818 IPR011009 -
Lan2g1160 837 Gene3D Transferase(Phosphotransferase) domain 1 623 829 - -
Lan2g1160 837 MobiDBLite consensus disorder prediction 492 522 - -
Lan2g1160 837 CDD STKc_IRAK 551 816 - -
Lan2g1160 837 SMART LRR_typ_2 287 310 IPR003591 -
Lan2g1160 837 SMART LRR_typ_2 311 334 IPR003591 -
Lan2g1160 837 SMART LRR_typ_2 335 359 IPR003591 -
Lan2g1160 837 SMART LRR_typ_2 192 216 IPR003591 -
Lan2g1160 837 SMART LRR_typ_2 144 168 IPR003591 -
Lan2g1160 837 Gene3D Phosphorylase Kinase; domain 1 551 622 - -
Lan2g1160 837 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 29 827 - -
Lan2g1160 837 ProSiteProfiles Protein kinase domain profile. 545 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1160 837 SUPERFAMILY L domain-like 98 408 - -
Lan2g1160 837 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 29 827 - -
Lan2g1160 837 Gene3D Ribonuclease Inhibitor 77 230 IPR032675 -
Lan2g1160 837 Pfam Leucine rich repeat N-terminal domain 82 118 IPR013210 -
Lan2g1160 837 Gene3D Ribonuclease Inhibitor 328 428 IPR032675 -
Lan2g1160 837 MobiDBLite consensus disorder prediction 817 837 - -
Lan2g1160 837 Pfam Leucine rich repeat 194 253 IPR001611 GO:0005515
Lan2g1160 837 Pfam Leucine rich repeat 265 324 IPR001611 GO:0005515
Lan2g1160 837 Pfam Protein tyrosine and serine/threonine kinase 548 813 IPR001245 GO:0004672|GO:0006468
Lan2g1160 837 Gene3D Ribonuclease Inhibitor 231 327 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1160 Lan-Chr2 22836506 22839639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1160 71 818 Receptor kinase-like Gene Family AT3G51740 63.111 0.0 916
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan2g1160 PK_Tyr_Ser-Thr 7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1160 - - gmx:100811174 1201.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1160 2 22836506 22839639 Lan11g0225 11 1424532 1427355 LSH
Lan15g0094 15 658793 662093 Lan2g1160 2 22836506 22839639 PCT
Lan2g1160 2 22836506 22839639 Lan15g0094 15 658793 662093 PCT