Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1158 ATGAACATGGAGGTTTATGATGAAGTTTGTGGCATAAACATTGTGCCTTTGGATTCTTCAAGAAAGAGGAAAAGTAGGAACAAAAGGGGTGGTCCTAGATCTGTAGCTGAGACTATTGCTAAGTGGAAGGAATACAATAAGAATCTAGAGTCTACAAGAGAAGATTGTAAGCCGAGGCGAAAAGCCCCGGCCAAGGGTTCAAAGAAAGGATGTATGAAAGGTAAAGGAGGACCCCAAAACTCACAGTGTAATTACAGGGGTGTTAGGCAGAGGACGTGGGGAAAGTGGGTTGGCGAAATTCGCGAACCGAATAGAGGAAGAAGACTTTGGTTAGGTACCTTCTCTACTGCTCAAGAAGCTGCTCTTGCATATGATGAAGCTGCCAGGGCTATGTATGGTCCTTGTGCACGCCTTAATTTTCCTCACATATCGGATTATAGTTGCGCGATGGAATCACTGGCTGCAACTTGTTGTAGTTCTTCAGTGGCAACTCCTGCAACTTCGGACACTACTTCAGTATATTCAGAGGTTTGTGCAGCTGAGGATGTGAAGGAGAAACCTTATCTTGATAATATCAACAATAAGGTTCATGAAGCTTATGAATCTGCCTGCTCAACTAGCAAATTGAAGCAAGAACCGAAGGATGATCCTGCAGATCTTGTAGACCCCGGGGGTGGGGAAATCGAAGATTTTAGACCAAAAGAAGCACATGATGTTGAACAGGTTGATGAGGATGTGAACAAGGATCAAAATCCAATGGATTTTTCATGGATTGATGGTATTGATTTTGATAGTTTTTCTACCGATGAGCTATTTCAGGTGGATGAGCTTTTGGGGCAATTAGATAATGAACCAATGAAAAGTTCTGAGTTGATGCAAGGTTTGGATTTTGGTCAAATGGATTTTCCCTGTGATAATAATCTTCAAGTTGAAGCCTCTTCAAGCTTTTTATATGAATTACAAAATCCAGATGCCAAGTTACTAGGAAGTTTGCCCCATATGGAACAGACTCCATCAGGTTTTGATTTTGGATTAGATTTATTGAAATCAGAAGATACATTGGACTATAATGGTGTTGAAGGGGAAGAGCAGAAACTTCTTAATTTGGATAATATGAACCATAATTCAGAATGGAATCCACTCAATGAAGGATGA 1155 0.4078 MNMEVYDEVCGINIVPLDSSRKRKSRNKRGGPRSVAETIAKWKEYNKNLESTREDCKPRRKAPAKGSKKGCMKGKGGPQNSQCNYRGVRQRTWGKWVGEIREPNRGRRLWLGTFSTAQEAALAYDEAARAMYGPCARLNFPHISDYSCAMESLAATCCSSSVATPATSDTTSVYSEVCAAEDVKEKPYLDNINNKVHEAYESACSTSKLKQEPKDDPADLVDPGGGEIEDFRPKEAHDVEQVDEDVNKDQNPMDFSWIDGIDFDSFSTDELFQVDELLGQLDNEPMKSSELMQGLDFGQMDFPCDNNLQVEASSSFLYELQNPDAKLLGSLPHMEQTPSGFDFGLDLLKSEDTLDYNGVEGEEQKLLNLDNMNHNSEWNPLNEG* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1158 384 Pfam AP2 domain 83 133 IPR001471 GO:0003700|GO:0006355
Lan2g1158 384 MobiDBLite consensus disorder prediction 208 231 - -
Lan2g1158 384 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 17 352 - -
Lan2g1158 384 ProSiteProfiles AP2/ERF domain profile. 84 141 IPR001471 GO:0003700|GO:0006355
Lan2g1158 384 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 17 352 - -
Lan2g1158 384 SMART rav1_2 84 147 IPR001471 GO:0003700|GO:0006355
Lan2g1158 384 MobiDBLite consensus disorder prediction 50 84 - -
Lan2g1158 384 SUPERFAMILY DNA-binding domain 84 142 IPR016177 GO:0003677
Lan2g1158 384 PRINTS Ethylene responsive element binding protein signature 85 96 IPR001471 GO:0003700|GO:0006355
Lan2g1158 384 PRINTS Ethylene responsive element binding protein signature 107 123 IPR001471 GO:0003700|GO:0006355
Lan2g1158 384 MobiDBLite consensus disorder prediction 204 231 - -
Lan2g1158 384 CDD AP2 83 142 IPR001471 GO:0003700|GO:0006355
Lan2g1158 384 Gene3D AP2/ERF domain 84 143 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1158 Lan-Chr2 22823697 22825479 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1158 21 370 AP2-EREBP Transcription Factor Family AT2G40340 38.462 6.88e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan2g1158 AP2 4.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1158 - K09286 lang:109340522 770.77