Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1151 ATGTCGTTCTTTAACTCTAATCCATTCGATTGGCACTACGACGATGGCGGAGATCTCGACCATGAAATCCTCGAAATCCATGGCCGCAGTTTTTCCGTCTTCTCCATTTTCTCCGTCCTCTTCATTATCGCCGTCATTGCCACCGCTCTCATGCTCTACTCCCGCCGGATATTCTTCTCCTGGGCTTTCTCTTCATCCCAGACACGCCACGCGCCGCTAACTTCACCGTCGCAACAGGGACTCGAACCTGAAACGATAAAGAAACTACCGATTGTACTGCATCGAGCGCCGTCGGATCAAGATAGCGCGCGTGAGTGCTGCATATGCTTGAGCGCGTTTAGAATGGGAGAGAAATTGAAGGTTTTGCCAGGATGTGATCATTGCTTTCATTGTGAGTGTGTTGATAATTGGCTTCAGAATCATAGTAATTGTCCTCTGTGTAGAGCTTCTCTTCAACTTCATGGTTCTTCATTTCCAACAATTCTCATTCAAGAACCACCCGTTAGACATTCTTAA 516 0.4709 MSFFNSNPFDWHYDDGGDLDHEILEIHGRSFSVFSIFSVLFIIAVIATALMLYSRRIFFSWAFSSSQTRHAPLTSPSQQGLEPETIKKLPIVLHRAPSDQDSARECCICLSAFRMGEKLKVLPGCDHCFHCECVDNWLQNHSNCPLCRASLQLHGSSFPTILIQEPPVRHS* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1151 171 SUPERFAMILY RING/U-box 86 154 - -
Lan2g1151 171 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 153 IPR013083 -
Lan2g1151 171 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 5 161 IPR044675 -
Lan2g1151 171 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Lan2g1151 171 Pfam Ring finger domain 105 148 IPR001841 -
Lan2g1151 171 SMART ring_2 106 147 IPR001841 -
Lan2g1151 171 PANTHER RING-H2 FINGER PROTEIN ATL66 5 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1151 Lan-Chr2 22772688 22773387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1151 11 157 C3H Transcription Factor Family AT3G11110 40.523 1.07e-24 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1151 - - gmx:100794554 169.088
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1151 2 22772688 22773387 Lan9g1344 9 20596499 20597407 LSH
Lan15g0108 15 744079 744886 Lan2g1151 2 22772688 22773387 PCT
Lan3g0964 3 21282268 21283021 Lan2g1151 2 22772688 22773387 PCT
Lan2g1151 2 22772688 22773387 Lan15g0108 15 744079 744886 PCT
Lan2g1151 2 22772688 22773387 Lan3g0964 3 21282268 21283021 PCT