Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1150 ATGGTTTCTATTGTGAATATGGAAAGTTACTACAATTCTTGTTGGCCTCTATGCACTAATTGGACTCAAAATACTCAATGCAATTCTGCACCAAACAGTGGTCAATCTCCTTTTTCAGTCCCAACACAAACAATGCCTCATGCCTCTGACTTTATTCAACCAAGTGAGTACCCTTCATGGCCTTTACCAATTGAAGGGGCTGCAGAACATAGAGCTGCAAGTGCTTCCAATAGCCATAGCCAAGCTGAGAAAAGGCGCCGGGACAGGATCAATGCACAGCTTGCAACCCTCCGAAAACTGATTCCAAAGTCTGATAAGATGGACAAAGCAGCATTACTCGGAAGTGTTGTAGAACATGTTAAAGATCTAAAGCGAAAAGCCATGGATATGAGCAAAGCCATTACAGTTCCAACTGAAATTGATGAAGTAACAATTGACTATTACCCTGCTGCTGAAGATGAAAGCTACACTAAAGTAAACATATTCAAAGACAACATTACCATCAAAGCTTCTGTTTGTTGCGATGATCGACCGGAACTGTTCTCTGAACTCATCCAAGTCCTCAAAGGCTTGAGACTCACAACCGTTAAAGCTGACATAGCGAGCTCGGGTGGGAGAATCAAAAGCATATTGGTGCTTTGCTCGAAGGATAGTGAGGAGGGTAGTGTTTGCCTTACCACTCTCAAACAATCCCTTAAATCAGCTGTGAACAAAATTGCTTCACTATCCACAGCATCAAATTATCCTACTAGAAGTAAGAGGCAGAGGTTCTTTTTGCCTTCTCATTGCTTACAATAA 798 0.4185 MVSIVNMESYYNSCWPLCTNWTQNTQCNSAPNSGQSPFSVPTQTMPHASDFIQPSEYPSWPLPIEGAAEHRAASASNSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVVEHVKDLKRKAMDMSKAITVPTEIDEVTIDYYPAAEDESYTKVNIFKDNITIKASVCCDDRPELFSELIQVLKGLRLTTVKADIASSGGRIKSILVLCSKDSEEGSVCLTTLKQSLKSAVNKIASLSTASNYPTRSKRQRFFLPSHCLQ* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1150 265 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 74 123 IPR011598 GO:0046983
Lan2g1150 265 CDD bHLH_AtAIG1_like 69 146 - -
Lan2g1150 265 PANTHER TRANSCRIPTION FACTOR BHLH30 49 263 IPR045847 GO:0003700|GO:0006355
Lan2g1150 265 Gene3D - 68 133 IPR036638 GO:0046983
Lan2g1150 265 PANTHER TRANSCRIPTION FACTOR BHLH51 49 263 - -
Lan2g1150 265 SMART finulus 80 129 IPR011598 GO:0046983
Lan2g1150 265 Pfam Helix-loop-helix DNA-binding domain 77 123 IPR011598 GO:0046983
Lan2g1150 265 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 76 130 IPR036638 GO:0046983
Lan2g1150 265 MobiDBLite consensus disorder prediction 68 87 - -
Lan2g1150 265 CDD ACT_UUR-ACR-like 171 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1150 Lan-Chr2 22762649 22764076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1150 70 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 48.485 2.07e-47 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan2g1150 HLH 6.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1150 - - gmx:100306102 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0109 15 750833 751963 Lan2g1150 2 22762649 22764076 PCT
Lan2g1150 2 22762649 22764076 Lan15g0109 15 750833 751963 PCT