Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1142 ATGGCTGTGTCAAACGGTGTAGAAACAGTGATAGAGTTTCTGAGGAAGAACGGTTTTTCAGAAGCTGAGTCAGCACTCAAACAAGATATCATAGATAAGGTTGGAGGTTCTCATTTGACATCATTTGACTATGACAAATTCTACTTTCCTATGCTCCCTCCGTTACCGCCGGTTAGACTCCGATCATCGGAACCTGCCGGAGGAGTCTTCTCTGTTTCCTCGGATGATGAGTTTTTTAGCATAGGTTCAATTATTTCTCGTGTCTCTTCTTCAGAATTTATCAATCCACATGGGATCTGCTCCGTTTCTCAGACTCGGAATGGTTCCGAATATTCATCTGACTATCACGATTTTGATATGCAAAACGAATCATATTGGTATAATGAAAATGATGATGAGTGTTTCATGACCCCTAATTTTGAAGGGGCCGATGCCTTTGGGTGTCGAAGTGAAGATAAGTTTGTCATGACATCAAAAACTGAGAATCAATATGACCATTCTCTGGGTCTCAATCACAACTACGAAGAATCACAATTCGAGGGAAATGGTGGTTACATGGACAAGGCATGCCTTAATAATTCATCTTTAGGGGATGGAAATGATACTTTTTCAGAAAGTTATTGTCATATGGATAATAAAAACCAGATTAATGAAGATTCTACAAGCTTCAGCTACCGTAATTTGAATGAAATCAATCTTAATGATTTTCGTTTGAAGGTTGTTGGGGATATTACCTCTTTTAATTCTGCTCCACAGCAGACTGTGAATCAAAATCTTGACTACTACACAAAAAACGACAGCAATGACGGGTACAAGGGTCCTTACGATTTAACTAACGAAGTTGCTGGAGTTGATCCACCAAATGCATATGAAGCTCCAGATGGTGGAGAACTTGCTGAAGAGTGCCAAGATCCAAAAATCATAGCATATGGAGAGGATACTACTACTGATGTTGAGGTCTTAAAGTACAGCCAAGATGATGAACATGAAGTATTTGACCTGAGAATTATACATAGAAAGAACAGGACTGGATATGAAGAAAACAAGGAAATGCCGATTGTGCTAAATACAATCATAGCTGGCAGGTACTATGTAACAGAATATCTCGGTTCAGCTGCTTTCAGTAGGGTTGTTCAGGCATATGATCTTCAGAGAGGAATAGATGTTTGCTTGAAGATTATTAAAAATGACAAAGACTTTTTTGATCAAAGCTTAGATGAAATCAGGCTTCTGAGACTTGTTAATAAGCATGATCCAGCAGATGAATGCCACATTCTGCGCCTCTATGACTATTTCTACTATCAGGAGCATTTATTCCTTGTAACCGAGCTTCTGCAAGCAAACTTATATGAATATCAGAAATTCAACCAAGAATCTGGAGGGGAAGCATATTTTACATTAAGCAGGTTACAGATCATTACTCGTCAATGTTTGGAGGCATTGCAATACTTGCATAACTTGGGAATTGTTCACTGTGACTTGAAGCCAGAAAATATTCTTATCAAAAGCTACAAAAGATGCAAAGTAAAGGTTATTGATCTCGGAAGCAGCTGCTTTAAAACAGACAATCTGTGCCTATATGTACAATCGCGATCTTATAGAGCTCCCGAAGTGATGTTAGGCCTTCAATATGATGAAAAGATTGACATATGGTCTCTTGGCTGTATATTGGCTGAGCTATGCTCTGGTGAAGTGCTCTTTCCAAATGATCCAATCGTGATGATTCTCGCACGCATGATTGGAATCTTGGGCCCTATTGACCTGGAGATGTTGGTGAAAGGGCAGGAAACACACAAGTACTTCACCGAAGAATATGATATTTATCATGTGAACGAGGAGACTAATCAACTTGAGTACATAATTCCAGAGTCAACATCATTGGAACAGCACCTACATGTTACAGATACTATGTTTGTAGACTTTGTCAAATACCTGCTTAACATCAACCCCAAAAGAAGGCCTACTGCAACACAGGCACTAAAGCATCCATGGATTTCATACATGTACAAGTCAAAGTAG 2019 0.3908 MAVSNGVETVIEFLRKNGFSEAESALKQDIIDKVGGSHLTSFDYDKFYFPMLPPLPPVRLRSSEPAGGVFSVSSDDEFFSIGSIISRVSSSEFINPHGICSVSQTRNGSEYSSDYHDFDMQNESYWYNENDDECFMTPNFEGADAFGCRSEDKFVMTSKTENQYDHSLGLNHNYEESQFEGNGGYMDKACLNNSSLGDGNDTFSESYCHMDNKNQINEDSTSFSYRNLNEINLNDFRLKVVGDITSFNSAPQQTVNQNLDYYTKNDSNDGYKGPYDLTNEVAGVDPPNAYEAPDGGELAEECQDPKIIAYGEDTTTDVEVLKYSQDDEHEVFDLRIIHRKNRTGYEENKEMPIVLNTIIAGRYYVTEYLGSAAFSRVVQAYDLQRGIDVCLKIIKNDKDFFDQSLDEIRLLRLVNKHDPADECHILRLYDYFYYQEHLFLVTELLQANLYEYQKFNQESGGEAYFTLSRLQIITRQCLEALQYLHNLGIVHCDLKPENILIKSYKRCKVKVIDLGSSCFKTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDPIVMILARMIGILGPIDLEMLVKGQETHKYFTEEYDIYHVNEETNQLEYIIPESTSLEQHLHVTDTMFVDFVKYLLNINPKRRPTATQALKHPWISYMYKSK* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1142 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Lan2g1142 672 CDD PKc_DYRK_like 363 665 - -
Lan2g1142 672 Gene3D Transferase(Phosphotransferase) domain 1 417 665 - -
Lan2g1142 672 SUPERFAMILY Protein kinase-like (PK-like) 352 668 IPR011009 -
Lan2g1142 672 SMART serkin_6 363 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1142 672 Pfam Protein kinase domain 365 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1142 672 ProSiteProfiles Protein kinase domain profile. 363 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1142 672 PANTHER DUAL SPECIFICITY PROTEIN KINASE 8 669 - -
Lan2g1142 672 Gene3D Phosphorylase Kinase; domain 1 358 444 - -
Lan2g1142 672 PANTHER HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED 8 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1142 Lan-Chr2 22656075 22672255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1142 360 660 MAP Kinase Gene Family AT5G19010 31.464 2.03e-33 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lan2g1142 Pkinase 7.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1142 - - gmx:100783988 985.326