Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1141 ATGTTGACTGAACCACCCTTCTCCGCCACCGTCACAACCACCATTGCCGCCGTATTAACCTTCTCTTTGTTATTACCATTATGCCATGCTCTGGGCTCTGCCACCAGCCTCGCCTTCATTGACGCCTCCGCCACCGTGTGCGGCATCGTGGCATCACAACCAACCGGACGCATTGAGTGCTACCGCCGCGGCCATGTTATCCCCGTCATCCCTGACGTTTCATTTTCCGCCATCTCCGGCGGAAGAAACTACTTCTGCGGTCTCAGGTCCGGTAACTACAGCTTACTTTGTTGGGACACCGTCTCTTCCAACGTTACTTTTGAAAGGAGAAGACTTTACCAAAATGACACTGTTCTATTCGAGAATCTCGCCGTTGGTGACACGCAAGTTTGCGCCACCGTTGTTGGTACCGGAACGGTGTCGTGCTGGAGAATCAATAGCGCGTTTGAATTGCCATCTGGGTATGAACAATTTGCTTCTATTTCATCTGGGTCAGGTTTTTCTTGTGGAATTATGAAGAATGGTTATCGTGTTCGGTGTTGGGGTAATGGATCTATTGCTAGTAGAATAGAGGGTGAGTTTAGAAACATGTCTATGTTGAGTATTATAGCTGGTGAATCACATGTTTGTGGGTTGAATTCAAATGGGTTTTTGGTATGTAGAGGAAGTAATAGTTTTGGTCAAATTGATGTTCCAGAAGGAGGGTCTTTCGAGTATTCTGGGCTGGCTCTTGGAGCTGAACATAGCTGTGCTATTAGGAGATTGAATGGTTCTGTTATTTGTTGGGGTGGTAGAGGATTGTTTTCTGTTAATTTTACACAAGGTGTTTCTTTTGAGACAATTGTTTCTGGCTCCAATTTTACATGTGGATTGACAACAAACAATTTTTCTGTGATGTGTTGGGGTCCTGGTTGGTCTAATAGCGATAGTTCGAGTTCTAGGTTTGTGCTTCCCTTGTCTCCTATTCTTCCTGGGCCTTGTGTTCAATCTTCTTGTAGCGAGTGTGGTATGTATCCTCAGTCTCAAATTTTGTGTTCTGGTCATGGTAACATTTGCAAGCCACGGCCTTGTTCACCTCAAATACCATTCCCGGCGACACCACCAGCTTTACCACCATTGGTGCAGCCACCATGCTTGGCTCCTGCGTGGTCGAAGGCATTGACAACTTGCTTGTTGGTATTTGCCATTGTTGGATCAGTAGGAGCTGTTGCTGGCATTTGCACCGTAATTTATTGCTTGTGGACTGGTGTTTGTTTAGGGAAGAAGAAAGTCCATAATTCTGTGCAGCCAACAATTACTAGAGGTGGCAGTTCAAATGGCGGTGTTAATAGCCCTTCAAGATCGTCCATCATTATGCGTCAGGGCTCGAGAATAATGCGGCGCCAGAGGAGTGGAACATCATCAACGAAACATCCAGACAGGGCGGAGGAGTTCACACTGGCTGAGCTTGCTGCGGCCACCAACAATTTCTCACTCGAGAACAAGATTGGTGCTGGGAGTTATGGTGTTGTTTATAGAGGCAAACTTGCCGATGGTTGCGAGGTGGCGATCAAGAGGGGTGACACTAGTACCAAGACAAAGAAGTTCCAAGAGAAAGAGAGTGCATTTGAATCAGAATTAGCGTTTTTGTCCCGTCTACACCACAAGCATTTGGTTAGGCTAGTTGGGTACTGTGAAGAGAAAGATGAAAGGCTCTTGGTGTATGAACACATGAAGAATGGGGCAATATATGATCATTTACATGACAAAAACAACGTGGACAGGAATAGTAGTGTCTTGAATTCTTGGAGAATGAGGATCAAAATTGCGTTGGATGCTTCACGAGGAATCGAATATCTTCATGATTATGCAGTTCCATCTATAATTCACAGAGATATCAAGTCGTCTAACATTCTGATCGATGCAAATTGGACGGCAAGAGTATCTGATTTTGGATTGTCATTGATGAGTCCAGATTCTGGCCATGATTATTGGCCTACCAAGGCAGCTGGAACGGTTGGATACATTGATCCTGAGTATTATGGTATGAATGTTTTGACAGCAAAGAGTGATGTCTATGGGCTCGGAGTGGTACTGTTAGAACTCTTAACAGGAAAGAGAGCTATATTCAAGCATGGTGAGAATGGAGGCACCCCGGTGAGTGTTGTAGAATATGCTGTGCCTGCAATCATGGGAGGAGAATTGTCGCAGATTTTGGACCCGAGGGTTGTACCACCAGAGTTGAATGAAACAGAAGCAGTGGAGCTGGTGGCCTATACTGCGATGCATTGTGTACATTTGGAAGGGAAGGATAGACCAACCATGGCTGACATTGTGGCCAATTTGGAGCGTGCTTTGACTCTTTGTGACACTAGTCATGGCAGCTTTTCCAGTGCAACAATCTCTACCGAATCTGTCTGA 2400 0.4558 MLTEPPFSATVTTTIAAVLTFSLLLPLCHALGSATSLAFIDASATVCGIVASQPTGRIECYRRGHVIPVIPDVSFSAISGGRNYFCGLRSGNYSLLCWDTVSSNVTFERRRLYQNDTVLFENLAVGDTQVCATVVGTGTVSCWRINSAFELPSGYEQFASISSGSGFSCGIMKNGYRVRCWGNGSIASRIEGEFRNMSMLSIIAGESHVCGLNSNGFLVCRGSNSFGQIDVPEGGSFEYSGLALGAEHSCAIRRLNGSVICWGGRGLFSVNFTQGVSFETIVSGSNFTCGLTTNNFSVMCWGPGWSNSDSSSSRFVLPLSPILPGPCVQSSCSECGMYPQSQILCSGHGNICKPRPCSPQIPFPATPPALPPLVQPPCLAPAWSKALTTCLLVFAIVGSVGAVAGICTVIYCLWTGVCLGKKKVHNSVQPTITRGGSSNGGVNSPSRSSIIMRQGSRIMRRQRSGTSSTKHPDRAEEFTLAELAAATNNFSLENKIGAGSYGVVYRGKLADGCEVAIKRGDTSTKTKKFQEKESAFESELAFLSRLHHKHLVRLVGYCEEKDERLLVYEHMKNGAIYDHLHDKNNVDRNSSVLNSWRMRIKIALDASRGIEYLHDYAVPSIIHRDIKSSNILIDANWTARVSDFGLSLMSPDSGHDYWPTKAAGTVGYIDPEYYGMNVLTAKSDVYGLGVVLLELLTGKRAIFKHGENGGTPVSVVEYAVPAIMGGELSQILDPRVVPPELNETEAVELVAYTAMHCVHLEGKDRPTMADIVANLERALTLCDTSHGSFSSATISTESV* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1141 799 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 6 797 - -
Lan2g1141 799 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 6 797 IPR044815 GO:0004674
Lan2g1141 799 SUPERFAMILY Protein kinase-like (PK-like) 467 775 IPR011009 -
Lan2g1141 799 Pfam Protein kinase domain 491 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1141 799 Gene3D Transferase(Phosphotransferase) domain 1 571 789 - -
Lan2g1141 799 SUPERFAMILY RCC1/BLIP-II 36 264 IPR009091 -
Lan2g1141 799 MobiDBLite consensus disorder prediction 453 472 - -
Lan2g1141 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Lan2g1141 799 Pfam Regulator of chromosome condensation (RCC1) repeat 159 185 - -
Lan2g1141 799 Gene3D - 30 195 IPR009091 -
Lan2g1141 799 Gene3D - 196 350 IPR009091 -
Lan2g1141 799 ProSiteProfiles Protein kinase domain profile. 490 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1141 799 ProSitePatterns Protein kinases ATP-binding region signature. 496 518 IPR017441 GO:0005524
Lan2g1141 799 SMART serkin_6 490 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1141 799 Gene3D Phosphorylase Kinase; domain 1 451 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1141 Lan-Chr2 22653710 22656564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1141 7 798 Receptor kinase-like Gene Family AT3G55950 60.513 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lan2g1141 Pkinase 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1141 - - gmx:100798905 1173.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1141 2 22653710 22656564 Lan11g0242 11 1544910 1547972 LSH
Lan2g1141 2 22653710 22656564 Lan9g1336 9 20544886 20547584 LSH
Lan15g0114 15 815038 817688 Lan2g1141 2 22653710 22656564 PCT
Lan2g1141 2 22653710 22656564 Lan15g0114 15 815038 817688 PCT