Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1135 ATGGAAATGTCTATGGTGCAGCAAGTTGTTCCTCGGCACGAAAACTATGCTCAAAGTCGGGCAACTGCTTTGCACAACGTGGAATCTACTATCACAGAACTTAGTGGTATCTTCACAAACTTGGCTACAATGGTTGCCCATCAAGGGGAACTAGCTATCAGGATTGATGACAACATGGATGAGTCATTGGCCAATGTTGAAGGAGCTCACAGTTCCTTACTGAGGCATTTCAACCAAATATCATCAAATAGATGGCTTCTAATCAAGATATTTGTCGTTTTGATAATTTTTCTGATAATCTTCTTATTCTTCCTGGCCTAA 321 0.405 MEMSMVQQVVPRHENYAQSRATALHNVESTITELSGIFTNLATMVAHQGELAIRIDDNMDESLANVEGAHSSLLRHFNQISSNRWLLIKIFVVLIIFLIIFLFFLA* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1135 106 PANTHER SYNTAXIN 1 105 IPR045242 -
Lan2g1135 106 SMART tSNARE_6 9 76 IPR000727 -
Lan2g1135 106 Gene3D - 5 106 - -
Lan2g1135 106 Pfam SNARE domain 51 102 IPR000727 -
Lan2g1135 106 ProSitePatterns Syntaxin / epimorphin family signature. 20 59 IPR006012 GO:0005484|GO:0006886|GO:0016020
Lan2g1135 106 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 14 76 IPR000727 -
Lan2g1135 106 PANTHER SYNTAXIN-31 1 105 - -
Lan2g1135 106 CDD SNARE_syntaxin5 17 89 - -
Lan2g1135 106 SUPERFAMILY t-snare proteins 7 69 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1135 Lan-Chr2 22604336 22605163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1135 1 106 SNARE and Associated Proteins AT5G05760 74.528 4.46e-55 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1135 K08490 - lang:109340304 170.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1135 2 22604336 22605163 Lan9g1328 9 20506317 20511040 LSH