Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1131 ATGCTTCCTTCTGTAGCGACCACCTTAGTCTCAAAATCCACTATCTTCCCACACCAAAAATCAACCCTTGCTTACCTTAAACTCTCCGTTTCAGACCTTCCTATGCTTTCTTGTCACTATATCCAAAAAGGATGTCTCTTTACTAAACCTTCAATTCCTACCCACACTCTCATTCAACTTCTCAAATCTTCACTCTCTCACACTCTCTCCCTTTTCCCTCCCCTCGCTGGTCGTTTAACCACCGATTCAAACGGTTACATTTACATCACTTGCAACGATGCTGGCGTTGATTTTCTTCATGTTAATGCTACTTCTTATAAAATCTGTGACCTTTTGTCCACACTTGATATCTCTCCATTGTTCAAAGAATTCTTCACTTTTGATAGGATGGTTAGTTATAATGGCCATTTCTCACCGATTCTTGCGGTTCAGGTTACGGAACTTTCTGACGGCGTTTTCATTGGCTGCGCTGTTAATCACGCCGTTACTGATGGTACATCTTTCTGGAACTTCTTTAACACTTTTGCTCAAGTATGTAGAGGAGCTAGTAAGGGAATGAATAAGGTCCCTGATTTCACTCGAGAATCTGTGCTGATTTCTAACGCCGTTCTACGGTTGCCGGAGGGTGGTCCTAAAGTAACGTTCGACGCTGATGCGCCGTTACGGGAGAGAATCTTCAGCTTTAGCCGTGAATCTATTCAGAAACTGAAAGCAAGGGTTAATTGTAGAAAATGGACGGAGGATAACGGCGTTGAGTTGATAATGAAAAACAGCAACGATTATCAACACAAAGAGAGTAACAAGGTTGCGACGATTTTTGAGAACTGGTTTCTCAAAAACGCAGATAACTCGAAACCGTTAATCGCGGATGAAACGGTTGAGATTTCGTCGTTTCAGTCTCTCTGCGCTTTGCTGTGGCGTGCGGTAACACGCGCGAGGAAGTTCCAGGCATCGAAAACGACGACGTTTAGAATGGCGGTTAACTGTCGCCACCGTATAGAACCGAAATTGGAAAGTTACTACTTCGGTAACGCGATTCAGAGCGTTCCAACTTACGCTTCCGCTGGTGAGGTCTTATCTAACGATCTACGGTGGTGCGCGGAGCAATTGAACAAGAACGTGAGGGCCCACGATAATTCTATGGTACACAAGTTCGTAGAAGATTGGGAAAAGAATCCAAGGGTTTTCCCGTTAGGGAACCCTGACGGTGCATCAATCACTATGGGTTCTTCACCGAGATTTCCAATGTATGATAATGATTTTGGGTGGGGAAGACCATTGGCGGTGCGGAGTGGGAAGGCGAATAAGTTTGACGGTAAGATCTCGGCGTTTCCGGGAAGAGATGGAAGCGGAACCGTTGATTTGGAGGTGGTTTTGTCGCCGGAAACAATGGCGGGGCTTGAGTCTGATCCTGAGTTTATGGTTTACGCTACGAGGCAATTATAG 1446 0.4516 MLPSVATTLVSKSTIFPHQKSTLAYLKLSVSDLPMLSCHYIQKGCLFTKPSIPTHTLIQLLKSSLSHTLSLFPPLAGRLTTDSNGYIYITCNDAGVDFLHVNATSYKICDLLSTLDISPLFKEFFTFDRMVSYNGHFSPILAVQVTELSDGVFIGCAVNHAVTDGTSFWNFFNTFAQVCRGASKGMNKVPDFTRESVLISNAVLRLPEGGPKVTFDADAPLRERIFSFSRESIQKLKARVNCRKWTEDNGVELIMKNSNDYQHKESNKVATIFENWFLKNADNSKPLIADETVEISSFQSLCALLWRAVTRARKFQASKTTTFRMAVNCRHRIEPKLESYYFGNAIQSVPTYASAGEVLSNDLRWCAEQLNKNVRAHDNSMVHKFVEDWEKNPRVFPLGNPDGASITMGSSPRFPMYDNDFGWGRPLAVRSGKANKFDGKISAFPGRDGSGTVDLEVVLSPETMAGLESDPEFMVYATRQL* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1131 481 Gene3D - 7 205 IPR023213 -
Lan2g1131 481 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 476 - -
Lan2g1131 481 Pfam Transferase family 8 474 - -
Lan2g1131 481 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 7 476 - -
Lan2g1131 481 Gene3D - 220 471 IPR023213 -
Lan2g1131 481 SUPERFAMILY CoA-dependent acyltransferases 40 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1131 Lan-Chr2 22567071 22568850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1131 59 468 Monolignol Biosynthesis Gene Families AT5G48930 27.896 1.81e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1131 - - vun:114195488 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1131 2 22567071 22568850 Lan9g1321 9 20470635 20472486 LSH
Lan4g0151 4 2397248 2398836 Lan2g1131 2 22567071 22568850 PCT