Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1125 ATGGAACTGGAAACTTTATATCCTACTTGTTTTATGTCAAGTTCAAATTGGTTTATGCAAGAGATCAATAACAACAACAACAACACAGAATGGAGTATAGAAGAGAATAAACAGTTTGAGAGTGCCCTTGCCATATACGATAAGGACACGCCGGATCGATGGCTTAAGGTTGCAGCCATGATTCCTGGAAAGACTGTGTTTGATGTGATCAAACAATATAAGGAATTGGAAGAAGATTTGAGTGAAATAGAAGCTGGCAGGGTTCCAATTCCATGCTATATTACCTCTGCTTTCACCTTTGAGTTGATTAGTAATCAGAACTATGAAGGTTGTAGAAAGAGAGCTGCAACTATCAGAGGTTCTGATCAGGAGAGGAAGAAAGGTGTTCCTTGGACTGAAGAGGAACATAGACGTTTTCTAATGGGACTTATGAAGTATGGTAAAGGGGATTGGAGAAATATTGCTCGCAATTTTGTGGTCACAAAGACTCCAACCCAAGTTGCTAGTCATGCTCAGAAGTACTACATAAGGCAAAAGGATTCTGGAGGGAAAGATAAAAGGAGACCTAGTATCCATGATATAACCACTGTAAATCTTGCAGAAACTACCACTTCATATAAGAACAATCCCCTTTTATCCAATGAGTCTCCAATGTCAAAAGTACAATTGGACTGTATTAATCACTACAATGATGGATCATTCATGGTTTTCGATCCGAGTTGTGATGACTTGTTGAAACTCCAAGGGCAGGATCTCTATGACTGTGCTTTCCATGAGGCTTATTCTAAGGAATCTAAGCTACACATTCCAAGTTTCAAAAAAGCTTCTAGAGATTTCAGTAATGAAGCTGTTTTTGGTATTCATGCACTGTAA 873 0.386 MELETLYPTCFMSSSNWFMQEINNNNNNTEWSIEENKQFESALAIYDKDTPDRWLKVAAMIPGKTVFDVIKQYKELEEDLSEIEAGRVPIPCYITSAFTFELISNQNYEGCRKRAATIRGSDQERKKGVPWTEEEHRRFLMGLMKYGKGDWRNIARNFVVTKTPTQVASHAQKYYIRQKDSGGKDKRRPSIHDITTVNLAETTTSYKNNPLLSNESPMSKVQLDCINHYNDGSFMVFDPSCDDLLKLQGQDLYDCAFHEAYSKESKLHIPSFKKASRDFSNEAVFGIHAL* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1125 290 Pfam Myb-like DNA-binding domain 130 174 IPR001005 -
Lan2g1125 290 Gene3D - 129 180 - -
Lan2g1125 290 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 126 178 IPR006447 GO:0003677
Lan2g1125 290 CDD SANT 130 174 IPR001005 -
Lan2g1125 290 Gene3D - 23 90 - -
Lan2g1125 290 SUPERFAMILY Homeodomain-like 29 81 IPR009057 -
Lan2g1125 290 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 261 IPR043363 -
Lan2g1125 290 ProSiteProfiles Myb-like domain profile. 123 175 IPR001005 -
Lan2g1125 290 SUPERFAMILY Homeodomain-like 125 180 IPR009057 -
Lan2g1125 290 ProSiteProfiles SANT domain profile. 131 179 IPR017884 -
Lan2g1125 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 123 179 IPR017930 -
Lan2g1125 290 SMART sant 127 177 IPR001005 -
Lan2g1125 290 SMART sant 27 79 IPR001005 -
Lan2g1125 290 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 3 261 - -
Lan2g1125 290 CDD SANT 30 76 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1125 Lan-Chr2 22520806 22523534 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan2g1125 Myb_DNA-binding 1.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1125 - - gmx:778039 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1125 2 22520806 22523534 Lan9g1319 9 20433278 20435142 LSH
Lan4g0155 4 2505871 2508199 Lan2g1125 2 22520806 22523534 PCT
Lan2g1125 2 22520806 22523534 Lan4g0155 4 2505871 2508199 PCT