Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1120 ATGATCGCACGGGAAGTGCCTGGGAGGTCCAACAAGTGTTGCCGGCTCCGGTGGTGTAATCAGCTTGACCCTTCCGTTATATGCAACCACTTCACTGAGGAAGAGGACAGACTTATAATTTCAGCCCATGGAAACAAATGGGCAGCAATTGCAAGGCTTTTTCCAGGCAGAACAGATAATGCCATCAAGAACCACTGGAATTCTATTCTAAAGCGCAGGCATGTGGAGTTGAAAACATATTTCCGAGCACATGCCGATGTGATAGAAGATGGTAGCTTTGAGAGAGCAAAGGTATCTTCTGAAGAAACCATGTCATTTGGGGATATCAATTCGTTGAATCCTCCAGAAGTTCGAAATATCGTGACGTTTAATGAAATTAAACAAAATGCAGAGAAACCTCCAAAAAAATATGTTGCTGAAGTGGAGGGACATCCTACACTTTATCGACCAGTATCAGGTATTAGTGCATTTTGCAATGCCTGCAGAAGTTTGACACAAATCTGA 504 0.4306 MIAREVPGRSNKCCRLRWCNQLDPSVICNHFTEEEDRLIISAHGNKWAAIARLFPGRTDNAIKNHWNSILKRRHVELKTYFRAHADVIEDGSFERAKVSSEETMSFGDINSLNPPEVRNIVTFNEIKQNAEKPPKKYVAEVEGHPTLYRPVSGISAFCNACRSLTQI* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1120 167 Pfam Myb-like DNA-binding domain 30 70 IPR001005 -
Lan2g1120 167 Gene3D - 1 27 - -
Lan2g1120 167 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 74 IPR017930 -
Lan2g1120 167 SUPERFAMILY Homeodomain-like 1 75 IPR009057 -
Lan2g1120 167 CDD SANT 31 70 IPR001005 -
Lan2g1120 167 PANTHER MYB PROTEIN-RELATED 1 152 - -
Lan2g1120 167 Gene3D - 30 87 - -
Lan2g1120 167 PANTHER MYB TRANSCRIPTION FACTOR-LIKE PROTEIN 1 152 - -
Lan2g1120 167 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 22 IPR017930 -
Lan2g1120 167 ProSiteProfiles Myb-like domain profile. 23 70 IPR001005 -
Lan2g1120 167 SMART sant 27 72 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1120 Lan-Chr2 22470504 22473330 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1120 1 161 MYB Transcription Factor Family AT3G09230 47.159 2.98e-42 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan2g1120 Myb_DNA-binding 3.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1120 K09422 - gmx:100781228 210.305