Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1119 ATGTTGGTAACTGAGGACAAGTCCCATGTTGTTGTTGTTAACATAGACAATGGCAGTGAAGGTTGTTGTTCTGATGAGGAACAAAGATCCACCCTTGATTCTGGTCCTGAGATTGTTGGAGTTTCTGAAAAAGTGAGAAGATCTTCTGCATCAGAGTGTTCATTGGAGTTAGATCTGGAAGGTACAGTATCTGATGTTAAGGTGCATTTGGCTAAGGTTGAGAGAGATTGTAGGATTTGTCATCTCAGCATGGATATGACAAACCATGAATCTGGAACCCCCATTGAGCTTGGATGTTCTTGTAAAGATGATTTAGCTGCTGCTCATAAACAGTGTGCCGAGGCTTGGTTCAAGATCAAGGGTAATAAAACTTGTGAAATCTGTGGATCAATTGCGCTCAACGTAGCAGGTGCAAATGAAGTTCAAATTACAGAACAATGGAATGAAGTAAATGATGCTTCCATGGTACAAACTGGACCTGCATCCCCTGCAGAAACTCGAAGTTTCTGGAAGGGCCATCGATTTCTGAATTTCCTTCTAGCTTGTATGGTCTTTGCCTTTGTCATATCATGGCTTTTTCACTTCAATGTGCCCTCATGA 600 0.4167 MLVTEDKSHVVVVNIDNGSEGCCSDEEQRSTLDSGPEIVGVSEKVRRSSASECSLELDLEGTVSDVKVHLAKVERDCRICHLSMDMTNHESGTPIELGCSCKDDLAAAHKQCAEAWFKIKGNKTCEICGSIALNVAGANEVQITEQWNEVNDASMVQTGPASPAETRSFWKGHRFLNFLLACMVFAFVISWLFHFNVPS* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1119 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 137 IPR013083 -
Lan2g1119 199 PANTHER OS01G0850200 PROTEIN 20 199 - -
Lan2g1119 199 SUPERFAMILY RING/U-box 74 130 - -
Lan2g1119 199 Pfam RING-variant domain 77 128 IPR011016 GO:0008270
Lan2g1119 199 PANTHER ZINC FINGER, RING-CH-TYPE 20 199 - -
Lan2g1119 199 SMART ringv_2 76 129 IPR011016 GO:0008270
Lan2g1119 199 CDD RING_CH-C4HC3_MARCH 77 129 - -
Lan2g1119 199 ProSiteProfiles Zinc finger RING-CH-type profile. 69 135 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1119 Lan-Chr2 22465651 22468486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1119 11 199 C3H Transcription Factor Family AT5G05830 60.825 8.80e-76 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1119 - - gmx:100818979 308.145