Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1112 ATGAGCACACAAATAGGGATTGATGAAGCGGTGTTGGACGACATAATCCGGCGACTCACGGAGGTCCGATTGGCCCGACCCGGTAAACAGGTTCAACTCTCCGAATCCGAAATCAAACAACTTTGTCTTGCTTCTAGAGATATCTTCCTCCACCAACCTAATTTGCTTGAACTCGAAGCCCCCATTAAGATTTGTGGGGACATTCATGGGCAGTACAGTGATTTGTTAAGGCTCTTTGAGTATGGGGGTTTACCTCCTAATGCTAATTATCTCTTTTTAGGAGACTATGTGGATCGTGGGAAGCAGAGCTTAGAAACCATATGTCTTTTGCTTTCATATAAAATCAAATATCCAGAAAACTTTTTCCTTTTGAGGGGGAATCATGAGTGTGCTTCCATTAACAGAATATATGGATTTTACGATGAATGTAAACGAAGGTTTAATGTGAGGCTTTGGAAAGCCTTTACAGACTGTTTTAACTGCCTTCCTGTGGCAGCCCTCATAGATGATAAAATATTGTGCATGCATGGTGGTCTTTCTCCTGAACTTACACACTTGGATGAAATCAGGAATCTGCCCCGTCCGATTGCTATCCCGGACACTGGCTTGCTCTGTGATTTGCTTTGGTCGGATCCTGGTAGAGATGTGAAGGGTTGGGGTATGAATGACAGAGGAGTCTCCTTCACCTTTGGCCCTGATATGGTGGCTGAGTTTTTGGCAAAGCATGACTTGGACCTGATCTGTCGTGCTCATCAGGTTGTAGAGGATGGGTATGAATTCTTTGCAGATCGGCAACTCGTTACAATATTTTCAGCTCCAAACTACTGTGGTGAATTTGACAATGCTGGTGCAATGATGAGTGTGGATGAAAACTTGATGTGCTCTTTCCAGATTCTCAAGCCTGCAGAGAAAAGGACAAAGTTCATGATGCCAAACAAAATGTGA 945 0.436 MSTQIGIDEAVLDDIIRRLTEVRLARPGKQVQLSESEIKQLCLASRDIFLHQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGLPPNANYLFLGDYVDRGKQSLETICLLLSYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDDKILCMHGGLSPELTHLDEIRNLPRPIAIPDTGLLCDLLWSDPGRDVKGWGMNDRGVSFTFGPDMVAEFLAKHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKRTKFMMPNKM* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1112 314 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2 307 - -
Lan2g1112 314 Gene3D - 4 312 IPR029052 -
Lan2g1112 314 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2 307 - -
Lan2g1112 314 Pfam Serine-threonine protein phosphatase N-terminal domain 12 59 IPR031675 -
Lan2g1112 314 SUPERFAMILY Metallo-dependent phosphatases 22 307 IPR029052 -
Lan2g1112 314 ProSitePatterns Serine/threonine specific protein phosphatases signature. 124 129 IPR006186 GO:0016787
Lan2g1112 314 PRINTS Serine/threonine phosphatase family signature 61 88 IPR006186 GO:0016787
Lan2g1112 314 PRINTS Serine/threonine phosphatase family signature 90 117 IPR006186 GO:0016787
Lan2g1112 314 PRINTS Serine/threonine phosphatase family signature 123 147 IPR006186 GO:0016787
Lan2g1112 314 PRINTS Serine/threonine phosphatase family signature 157 183 IPR006186 GO:0016787
Lan2g1112 314 PRINTS Serine/threonine phosphatase family signature 186 213 IPR006186 GO:0016787
Lan2g1112 314 PRINTS Serine/threonine phosphatase family signature 243 263 IPR006186 GO:0016787
Lan2g1112 314 PRINTS Serine/threonine phosphatase family signature 265 281 IPR006186 GO:0016787
Lan2g1112 314 Pfam Calcineurin-like phosphoesterase 61 253 IPR004843 GO:0016787
Lan2g1112 314 CDD MPP_PP1_PPKL 11 301 - -
Lan2g1112 314 SMART pp2a_7 33 303 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1112 Lan-Chr2 22407127 22412569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1112 40 249 Calmodulin-binding Proteins AT5G63870 30.800 2.05e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1112 K06269 - gmx:100807069 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1112 2 22407127 22412569 Lan11g0268 11 1752145 1757423 LSH