Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1091 ATGGGTTGTTGTTTTAGTGTAAGCAGAATCAAAGCTGAGAGCCCTCCACGCAATGGTTTGAGATCAAAGGATGGCAGCAAAGAAGTTGGTCTGGGTAGCATGGTTTCCACTCCTTCTGTGCCTCAAACTCCTCGGACCGAGGGCGAGATCTTGAAGTCCTCACGTATGAAGAGCTTCACCTTTAGTGAACTAAGAACTGCTACGAGGAACTTTCGACCAGATAGTGTGGTGGGCGAAGGTGGATTTGGTTGTGTATTCAAGGGATGGATTGATGAGCAGACACTTGCACCTGTTAAACCAGGGACTGGAATGGTCATTGCTGTGAAGAGGCTTAACCAAGAAGGTTTACAGGGACACAGTGAATGGTTGACAGAAATCAATTACCTGGGGCAGCTGCGCCATCCTAATCTTGTGAAACTGATTGGTTACTGCTTAGAGGATGAACACAGACTTTTGGTGTATGAGTTTCTTGCCAAGTGCAGTTTGGACAACCATTTATTTAGGAGGGCTTCTTATGTTCAACCACTTTCTTGGAAAATCCGGATGAAGGTTGCTCTTGATGCTGCTAAAGGTCTTGCCTTTCTTCACAGTGATGAAGCAAAAGTGATATATCGAGACTTCAAAACATCGAATGTCTTGCTTGATTCGAACTATAATGCAAAACTTTCTGATTTTGGCTTGGCAAAGGATGGACCAGCTGGTGATATGAGTCATGTCTCTACAAGGGTAATGGGCACATATGGCTATGCTGCTCCTGAATATATGGCCACAGGTCATTTGACAAAAAAGAGTGATGTTTACAGCTTTGGGGTTGTTCTACTAGAAATCATGTCAGGCAAACGTGTGCTAGATAACAACAGGCCATCAGGGGAGCACAATCTCATTGAATGGGCGAAACCTTACCTCAGCAGTAACCGTAGGATCTTTCAAGTTATGGATGCCCGCATCGAAGGCCAATACACATTGCGCAATGCAATGAAAGTGGCTGACCTTGTAGTTCTATGTATTTCTGCAGAACCAAGATTTAGACCAAAGATGGAAGAAGTGGTGGCAGCATTGGAACAACTTCAGGATTCTGATGACAAAGGAGTGGGAAGTTCTCGGGTTCAAACTTCCAAAAGGAGTGATCATGGCTCAATCAGCAGTGGCTCGAGCAGCAGTGGCTCGAGCAGTAGTGGTCCTAAATATAGAAGTTAA 1197 0.4478 MGCCFSVSRIKAESPPRNGLRSKDGSKEVGLGSMVSTPSVPQTPRTEGEILKSSRMKSFTFSELRTATRNFRPDSVVGEGGFGCVFKGWIDEQTLAPVKPGTGMVIAVKRLNQEGLQGHSEWLTEINYLGQLRHPNLVKLIGYCLEDEHRLLVYEFLAKCSLDNHLFRRASYVQPLSWKIRMKVALDAAKGLAFLHSDEAKVIYRDFKTSNVLLDSNYNAKLSDFGLAKDGPAGDMSHVSTRVMGTYGYAAPEYMATGHLTKKSDVYSFGVVLLEIMSGKRVLDNNRPSGEHNLIEWAKPYLSSNRRIFQVMDARIEGQYTLRNAMKVADLVVLCISAEPRFRPKMEEVVAALEQLQDSDDKGVGSSRVQTSKRSDHGSISSGSSSSGSSSSGPKYRS* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1091 398 MobiDBLite consensus disorder prediction 32 49 - -
Lan2g1091 398 MobiDBLite consensus disorder prediction 360 398 - -
Lan2g1091 398 PANTHER KINASE 1B 24 383 - -
Lan2g1091 398 ProSiteProfiles Protein kinase domain profile. 71 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1091 398 SUPERFAMILY Protein kinase-like (PK-like) 49 356 IPR011009 -
Lan2g1091 398 Pfam Protein tyrosine and serine/threonine kinase 75 353 IPR001245 GO:0004672|GO:0006468
Lan2g1091 398 MobiDBLite consensus disorder prediction 357 398 - -
Lan2g1091 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Lan2g1091 398 Gene3D Transferase(Phosphotransferase) domain 1 158 378 - -
Lan2g1091 398 ProSitePatterns Protein kinases ATP-binding region signature. 77 109 IPR017441 GO:0005524
Lan2g1091 398 MobiDBLite consensus disorder prediction 13 49 - -
Lan2g1091 398 Gene3D Phosphorylase Kinase; domain 1 46 156 - -
Lan2g1091 398 PANTHER OS01G0588500 PROTEIN-RELATED 24 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1091 Lan-Chr2 22164317 22167696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1091 41 353 Glycoside Hydrolase AT3G07070 46.769 1.97e-102 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan2g1091 PK_Tyr_Ser-Thr 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1091 - - gmx:100800735 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1091 2 22164317 22167696 Lan9g1287 9 20048562 20051626 LSH
Lan16g0637 16 8162008 8166178 Lan2g1091 2 22164317 22167696 PCT
Lan2g1091 2 22164317 22167696 Lan16g0637 16 8162008 8166178 PCT