Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1089 ATGAGAAAACCTTGTTGTCACAAAGAAAGCACCAACAAAGGTGCTTGGTCCAAGCAAGAGGACCAAAAGCTTATTGATTATATACAGGTTCATGGTGAAGGTTGTTGGAGTTCAATTCCCAAGGCTGCTGGTTTGTATCGTTGTGGGAAAAGCTGTAGGTTAAGATGGTTAAACTACTTACGACCAGACATAAAACGTGGAGTGTTTGGCCAAGATGAAGAAGATCTCATCATTAAACTTCATGCCCTCCTTGGAAATAGGTGGTCTCTTATAGCGGGAAGGTTGCCTGGACGAACTGACAATGAGGTCAAGAACTATTGGAATTCTCACATAAAAAGAAAGCTAATAAATATGGGGATTGATCCAAATAATCACAAACTACATGTTCACCAAATTCATGCTACGAGTGCTTCATCATCTGTGTCTATGAAAAATGACCATAGAGTCTCTCCTTATTTCAAATGCTATGATGCTGTGAATGATGAAGTTTTATCATCCAACTTAAATCTTGACCTAACCATTGCTTTACCTTCACCTAGGGTTGATATTGTGGAGGACAAACCTACACCAAATTCTGAGTCCAGGACTGAGAGAAAGGAAACGATACATGCATGGTTATAA 621 0.3945 MRKPCCHKESTNKGAWSKQEDQKLIDYIQVHGEGCWSSIPKAAGLYRCGKSCRLRWLNYLRPDIKRGVFGQDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHIKRKLINMGIDPNNHKLHVHQIHATSASSSVSMKNDHRVSPYFKCYDAVNDEVLSSNLNLDLTIALPSPRVDIVEDKPTPNSESRTERKETIHAWL* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1089 206 PANTHER MYB TRANSCRIPTION FACTOR 2 191 - -
Lan2g1089 206 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Lan2g1089 206 CDD SANT 71 111 IPR001005 -
Lan2g1089 206 Gene3D - 13 65 - -
Lan2g1089 206 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Lan2g1089 206 CDD SANT 15 60 IPR001005 -
Lan2g1089 206 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Lan2g1089 206 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Lan2g1089 206 Gene3D - 68 145 - -
Lan2g1089 206 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 191 - -
Lan2g1089 206 MobiDBLite consensus disorder prediction 186 206 - -
Lan2g1089 206 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Lan2g1089 206 MobiDBLite consensus disorder prediction 183 206 - -
Lan2g1089 206 SMART sant 12 62 IPR001005 -
Lan2g1089 206 SMART sant 65 113 IPR001005 -
Lan2g1089 206 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Lan2g1089 206 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1089 Lan-Chr2 22146303 22148494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1089 2 146 MYB Transcription Factor Family AT4G09460 66.897 5.50e-73 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan2g1089 Myb_DNA-binding 6.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1089 K09422 - gmx:100793444 279.256