Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1080 ATGAACTCCATTCTCTTCCTTTTCTTCTTTTTATTTGTCATTGCCGGCGCCGCCGACCTAGCTTCCGACAGAGCCGCCCTCGTAGCCCTACGCGCCGCCGTGGGTGGCCGTTTACTCCTATGGGACCTGACCCAAACAACCCCTTGTTCATGGAACGGTGTGTTCTGCAACGAAAGCAGGGTCACAATGTTGCGTTTTCCGGCGATGGGTCTCTCCGGGAACCTTCCTTTGGGTTTAGGGAACCTTACTCAGTTAATAACCCTTTCTCTAAGGGTAAATGCACTAACGGGTACAATTCCCTCAGATTTCGCTAACCTTGTTAACTTGAGGAACCTTTATCTTCATGATAACTTTTTCTCTGGTGAAATTCCTGATTTTGTGTTCAGTATGCAGAATTTGGTGAGGTTGAGTTTGAATAAGAACAATTTCAGTGGTGAGATCTCACCAAAGTTTAATAAACTCACTAGTTTGGGTTCTCTTTTTTTGGAGAATAACAATTTCACTGGGTCAATTCCTGACCTTAATGTTCCACCTCTTCAGCAATTCAATGTTTCAAATAATCACTTAAATGGGTCTATTCCTAAGACATTTTCACATTTGGATGAAAGTGCTTTCGCTGGGAATTCACTTTGTGGAAAGCCCTTGCAACTTTGCCCTGGAACTGAGGGTGGAAAAAAGAAATTGTCCGGGGGCGCAATTGCGGGAATTGTGATCGGTTCTTTGTTTGGTTTGTTGTTGATTCTCTTGATTGTATTCTTATTGTGTAGAAAAAAGGGTGGTAGAAGTGATTCCGATGGCGTTGCGCCTGCAAAGCAGGCTGAGGCTGTGGCGCTGCGCGAGAGGAGCAGTGGCGACAGTGAGAACAATACTAATGCTAGTACTAGTAATTCAGCTGTCGCAGCAGCACAAGTGGGTGGTAAGAATTTGGTATTTTTCGGGAATGTGATTAAGCCTTTTGATCTTGAGGAATTACTGAGGGCTTCAGCTGAAGTGTTGGGGAAGGGGACTTTCGGAACAACTTATAAGGCCACTATGGATTCGGGGATGACCGTGGCGGTGAAGAGGTTGAGGGATTTTATTGCTGTGGAAAACGAATTCAGAGAGAAAATTGAGCAAGTGGGGAAGATGGCTCATGAGAACTTGGTCCCACTCAGAGGTTATTATTTTAGCCGGGACGAAAAACTTATCGTGTATGATTACATGCCGATGGGAAGCTTATCTGCCCTCTTACATGCAGATAGTGGAGCTGGCAGGACTCCACTGCAATGGGAAACAAGGTCTGCCATTGCCCTTGGTGCTGCTCGCGGAATTGCATACCTACATTCACATGGCCCGACATCGTCCCATGGAAATATAAAGTCATCAAATATCCTCCTCACCAAATCCTACGAAGCCCGTGTCTCTGACTTTGGCCTTGCTTATCTTGCGCTCCCAACCTCTACACCTAACCGTGTCTCTGGTTACCGTGCCCCAGAAGTCACAGATGCTCGCGAAGTATCCCAACAAGCAGATGTCTATAGCTTCGGCATAACACTTTTGGAGCTGCTTACAGGTAAGGCTCCTAGTCACTCTTCACTTAGCGAAGAAGGGGCAGACCTCCCAAGATGGGTTCAATCTGTGGTTCAGGAGGAGTGGAACAATGAGGTTTTCGATGTGGAGCTTCGCAGACACCAAAATGTTGAGGAGGAAATGGTCAAGCTATTGCAGCTTGCAGTTGAATGTGCTGCTCAATATCCTGACAAGAGACCTTCCATGGATGTGGTCGCAAATCGAATTCAGGAAATTTATAATGCTAGCATAGAGAAAGAGGGAGTTTCCCAGGACTATTATAGCGTGCCGTAA 1842 0.4609 MNSILFLFFFLFVIAGAADLASDRAALVALRAAVGGRLLLWDLTQTTPCSWNGVFCNESRVTMLRFPAMGLSGNLPLGLGNLTQLITLSLRVNALTGTIPSDFANLVNLRNLYLHDNFFSGEIPDFVFSMQNLVRLSLNKNNFSGEISPKFNKLTSLGSLFLENNNFTGSIPDLNVPPLQQFNVSNNHLNGSIPKTFSHLDESAFAGNSLCGKPLQLCPGTEGGKKKLSGGAIAGIVIGSLFGLLLILLIVFLLCRKKGGRSDSDGVAPAKQAEAVALRERSSGDSENNTNASTSNSAVAAAQVGGKNLVFFGNVIKPFDLEELLRASAEVLGKGTFGTTYKATMDSGMTVAVKRLRDFIAVENEFREKIEQVGKMAHENLVPLRGYYFSRDEKLIVYDYMPMGSLSALLHADSGAGRTPLQWETRSAIALGAARGIAYLHSHGPTSSHGNIKSSNILLTKSYEARVSDFGLAYLALPTSTPNRVSGYRAPEVTDAREVSQQADVYSFGITLLELLTGKAPSHSSLSEEGADLPRWVQSVVQEEWNNEVFDVELRRHQNVEEEMVKLLQLAVECAAQYPDKRPSMDVVANRIQEIYNASIEKEGVSQDYYSVP* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1080 613 MobiDBLite consensus disorder prediction 282 296 - -
Lan2g1080 613 MobiDBLite consensus disorder prediction 276 296 - -
Lan2g1080 613 SUPERFAMILY Protein kinase-like (PK-like) 330 591 IPR011009 -
Lan2g1080 613 Gene3D Phosphorylase Kinase; domain 1 291 400 - -
Lan2g1080 613 PANTHER INACTIVE RECEPTOR KINASE-RELATED 5 600 - -
Lan2g1080 613 Gene3D Transferase(Phosphotransferase) domain 1 401 610 - -
Lan2g1080 613 CDD STKc_IRAK 332 595 - -
Lan2g1080 613 PANTHER OS05G0588300 PROTEIN 5 600 - -
Lan2g1080 613 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Lan2g1080 613 Gene3D Ribonuclease Inhibitor 176 222 IPR032675 -
Lan2g1080 613 Gene3D Ribonuclease Inhibitor 21 175 IPR032675 -
Lan2g1080 613 ProSiteProfiles Protein kinase domain profile. 326 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1080 613 Pfam Protein kinase domain 329 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1080 613 SUPERFAMILY L domain-like 43 200 - -
Lan2g1080 613 Pfam Leucine rich repeat N-terminal domain 21 57 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1080 Lan-Chr2 22047667 22050729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1080 19 595 Receptor kinase-like Gene Family AT1G48480 56.863 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan2g1080 Pkinase 1.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1080 - - gmx:100801103 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1080 2 22047667 22050729 Lan11g0310 11 2017201 2020052 LSH
Lan2g1080 2 22047667 22050729 Lan9g1278 9 19991901 19995212 LSH