Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1074 ATGTCGTTACTTTCCTTCATCTTTGTTCTTTTCACTATTTTTTTCTTTATGAATGACGTAACTATAACTGCTACTACTGAGTTTGACTTTGGAACCTTAACCTTAACCAGCCTCAAGCTTCTCGGCGATGCCCACTTAAAAAACGGCACCGTCTGCCTCACGCGCGACCTCGCCGTTCCCAATTCCGGCGCTGGCAGAGCCTTATATTCAAGTCCGATACGGTTCCGGCAACCCGGAGCTTTTTCTCCGGCGAGCTTCTCCACCTTCTTTTCCTTTTCTGTTATCAACCTCAACCCTTCTTCCATTGGCGGCGGACTTGCATTCCTCATCTCGCCGGACGATGAATCCATCGGAGACGCCGGCGGATTCCTCGGCCTCGGCGGCGGCGGAAGTTTTGTGGCTGTGGAGTTTGACACCCTAATGGATGTGGAATTCAATGATGCTAATGGAAACCATGTCGGGGTGAACCTTAACACGATGGTTTCATCTGAAGTTTGTGACTTGGGTGAGATTGGAATCGATCTCAAAAGTGGGGACACGGTGAATGCATGGATTGAGTTTGATGGATCCACAAAAGGGTTAAGCGTGTGGGTTTCGTATTCGAATCTGAAACCGAAAGAACCGATTTTGACTTTGAATCTCGACGTGGATCAGTTTTTCAATGATTTTATGTATGTGGGGTTCTCTGCTTCTACACAAGGAAGCACAGAAGTTCACAATGTTGAGTGGTGGAGCTTTAGTTCTTCTTTTGATTTATCGGCTGTGGCGGCAGCACCACCACCACCTCCGGTGGTCAGTTTGATGAACCCGGGTGCCAATTCGATAAAGTCGCCGCCGCCCTCTTTGGCGTCTTCAACTCCATCCAATGCTCAACAAAAGGATAGTAAGTCTTCTTGCCATAATGGACTATGCAAACAGGGTTTAGGTGCAGTTGCTGGGGTTGTGAGTGCTGGGGCTTTTGCTTTGGCTCTTTTTGGGGGTGCATTTATTTGGGTTTATTCTAAAAAGTTCAAGCATGTAGAGAAGTTGGGTTCAATAGGATCAGAGTTTATCAAAATGCCTAAACAGTTTAGTTGTAAGGAGCTTAAAGCAGCTACTAAGTGCTTCAATGAGAATAGGATAATTGGTCATGGTGCATTTGGGACTGTGTATAAGGGCATTTTGCCTGAAAATGGGGACATTGTTGCGGTGAAGAGATGTGGCCATAGTGGTCAGGGTAAGAATGAGTTTTTGTCTGAGTTATCCATAATTGGGACCCTTAGACATCGGAATCTTGTCCGCCTTCAGGGTTGGTGCCATGAGAAAGGCGAGATTTTATTGGTGTATGACTTGATGCCTAATGGAAGTTTAGATAAGGCTTTGTTTGAGGCTAGAATACCGCTGTCTTGGCCACACAGGCGCAAGATTTTGTTAGGCGTTGCATCTGCGTTAGCCTACTTGCATCAGGAATGTGAGAATCAGGTAATTCACCGGGACATTAAGACTAGTAACATTATGTTGGATGAAGGGTTCAATGCTAAGTTGGGCGATTTTGGTTTGGCGAGGCAAACCGAGCATAACAAGTCTCCAGATGCCACAGTGGCTGCCGGGACAATGGGTTACTTGGCACCTGAGTATCTCCTCACAGGTAAAGCTACAGAGAAAACCGATGTTTTTAGTTATGGTGCTGTGGTTCTTGAGGTGGCTAGTGGGAGAAGACCGATAGAGAAGGATGCCACTAGGGTTGGTAAAGTTGGGGTTTGCAGCAATTTGGTAGAATGGGTTTGGAGTTTGCACCGTGAAGGGAGGTTGCTAACAGCGGCTGATGAAAGACTAGAGGGACAGTTTGATCGAGAGGAAATGAGGAGGTTACTCTTGGTTGGGCTAGCTTGCTCCCACCCTGACCCATTGTCTAGACCCACTATGAGGAGTGTGGTTCAGATGCTGGTCGGAGAGGCCGGAGTGCCTATAGTCCCGAGAATCAAGCCATCTACAGGTTGTAGTACTTCTCACTCACACCTCTTACTGAGCTTGCAAGATAGTGTATCTGACTGTGATGGTATAATCACCATATCCACCTCCTCATCAGAGAACAGCTTCAATGGTGGAGATATAGTATGA 2100 0.4676 MSLLSFIFVLFTIFFFMNDVTITATTEFDFGTLTLTSLKLLGDAHLKNGTVCLTRDLAVPNSGAGRALYSSPIRFRQPGAFSPASFSTFFSFSVINLNPSSIGGGLAFLISPDDESIGDAGGFLGLGGGGSFVAVEFDTLMDVEFNDANGNHVGVNLNTMVSSEVCDLGEIGIDLKSGDTVNAWIEFDGSTKGLSVWVSYSNLKPKEPILTLNLDVDQFFNDFMYVGFSASTQGSTEVHNVEWWSFSSSFDLSAVAAAPPPPPVVSLMNPGANSIKSPPPSLASSTPSNAQQKDSKSSCHNGLCKQGLGAVAGVVSAGAFALALFGGAFIWVYSKKFKHVEKLGSIGSEFIKMPKQFSCKELKAATKCFNENRIIGHGAFGTVYKGILPENGDIVAVKRCGHSGQGKNEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARIPLSWPHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNAKLGDFGLARQTEHNKSPDATVAAGTMGYLAPEYLLTGKATEKTDVFSYGAVVLEVASGRRPIEKDATRVGKVGVCSNLVEWVWSLHREGRLLTAADERLEGQFDREEMRRLLLVGLACSHPDPLSRPTMRSVVQMLVGEAGVPIVPRIKPSTGCSTSHSHLLLSLQDSVSDCDGIITISTSSSENSFNGGDIV* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1074 699 MobiDBLite consensus disorder prediction 275 297 - -
Lan2g1074 699 Gene3D - 24 258 - -
Lan2g1074 699 Pfam Protein kinase domain 369 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1074 699 ProSitePatterns Protein kinases ATP-binding region signature. 375 398 IPR017441 GO:0005524
Lan2g1074 699 Gene3D Phosphorylase Kinase; domain 1 333 444 - -
Lan2g1074 699 ProSitePatterns Legume lectins beta-chain signature. 133 139 IPR019825 -
Lan2g1074 699 Gene3D Transferase(Phosphotransferase) domain 1 445 646 - -
Lan2g1074 699 PANTHER - 17 692 - -
Lan2g1074 699 ProSiteProfiles Protein kinase domain profile. 369 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1074 699 CDD STKc_IRAK 375 642 - -
Lan2g1074 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Lan2g1074 699 SUPERFAMILY Protein kinase-like (PK-like) 350 662 IPR011009 -
Lan2g1074 699 CDD lectin_legume_LecRK_Arcelin_ConA 42 250 IPR001220 GO:0030246
Lan2g1074 699 Pfam Legume lectin domain 27 251 IPR001220 GO:0030246
Lan2g1074 699 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 17 692 - -
Lan2g1074 699 SMART serkin_6 369 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g1074 699 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 256 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1074 Lan-Chr2 21997329 21999854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1074 1 681 Receptor kinase-like Gene Family AT3G53380 69.784 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lan2g1074 Pkinase 9.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1074 - - lang:109356779 1094.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0225 4 3704238 3706583 Lan2g1074 2 21997329 21999854 LSH
Lan2g1074 2 21997329 21999854 Lan9g1264 9 19897465 19899968 LSH
Lan4g0225 4 3704238 3706583 Lan2g1074 2 21997329 21999854 PCT
Lan2g1074 2 21997329 21999854 Lan2g1074 2 21997329 21999854 PCT
Lan2g1074 2 21997329 21999854 Lan9g1264 9 19897465 19899968 PCT
Lan9g1264 9 19897465 19899968 Lan2g1074 2 21997329 21999854 PCT
Lan2g1074 2 21997329 21999854 Lan4g0225 4 3704238 3706583 PCT