Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1070 ATGGCTATTCAAGATCAAGATGGAGTTACTAGATTACAAGGTGGTCTTTCTCAAGGAAATGGAGTGTCTTCGAGTCCTGGTGTGCATTCTGTTACATATATTCAACCACAGGATCAGTTTTCTTCCGGAAATAGCAATGCCCTTAAGGTGAGGAAAGCATATACTATCTCTAAGCAAAGAGAGAAATGGACAGATGAAGAACATAAGAAGTTTCTTGAAGCTTTAAAGCTTTATGGCCGAGCCTGGCCACGAATTGAAGAACATGTTGGCACAAAGACAGCTGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTTTCTAAGGTTACTCGTGATTCAAGTGGGAGCAACACAAGCTTGGTTGAGTCGATTGAGATTCCACCTCCACGACCAAAACGAAAGCCAATGCATCCTTACCCGCGTAAATTAGTTGAGACTCGCAAGAAGAGAGTTTCAAATACAGAACAGCCACTGAGGCCCTGCTCCCTTAAGTCATCACATTTCGATCAAGAAGACATATCTCCCAAATCAGTATTATCTGCAGATGTTTCAGAAGCACTTGGTTCATCGGATTCAGATACACCAACTCAAAGTTTATCCCCATTGTCATCCATTAATGGTGTCCATACCAGTGGTTTTTCTCATGTTGAACCCAAAACATCATTTGAGGAACATGGATCTCCACCACCAGCTGGACTAAACACTGGTTTAGCTCATGATGAGCAACCTCTTGAGAAACTCGAGCTTTTGCACGATGAAAGTGTTTCTACCAAAGAAGTTGCAGCAGAAGAATCATCCGGTTACACTCTCAAACTTTTTGGGACAACTTTATTTGTAACAGATACCAGCAGACCATCTTCTCCATCAGTGGAGGCATGCAAACCAATACCTGCCCCGTATTACACGCAACTTCAGAGTGAAAATTCTGATATATCTGAAAGTCTTTCACCTATTGTTCCTTGGTGGAGCATTTCCCTCGATAGACCTTCAATGCCACTGCACAAGGAGCATGAGGGGAAACATATAGATTCTAATCTCATGGACTTTGAAGATAAAGAGGTCCAGAAGGAAGGATCTTCAACCGGTTCGAATTCGAATAATAGTTCAGTCCATGATGGAGAGAACAATGAAAGTTCAGGTGACCAAGCCAAAAGTCATGTCACTCATGTGCATTGCTTTAACAAGGTGGATGAACTGTTGAACCTTCTTGGCCGCACCAATGCACAGAGTGAAATATCAGCCATATCTAAGCTAAGAGTGAGACCTAATACCAGCAGGAAAGGATTTGTTCCCTATAAAAGGTGCATGGCAGAGAGAGAAAACCATAACTTATTAGTAACAGGTGAAGAAATGGAGATGCAACAAATAAGGCTATCATTGTAA 1380 0.4181 MAIQDQDGVTRLQGGLSQGNGVSSSPGVHSVTYIQPQDQFSSGNSNALKVRKAYTISKQREKWTDEEHKKFLEALKLYGRAWPRIEEHVGTKTAVQIRSHAQKFFSKVTRDSSGSNTSLVESIEIPPPRPKRKPMHPYPRKLVETRKKRVSNTEQPLRPCSLKSSHFDQEDISPKSVLSADVSEALGSSDSDTPTQSLSPLSSINGVHTSGFSHVEPKTSFEEHGSPPPAGLNTGLAHDEQPLEKLELLHDESVSTKEVAAEESSGYTLKLFGTTLFVTDTSRPSSPSVEACKPIPAPYYTQLQSENSDISESLSPIVPWWSISLDRPSMPLHKEHEGKHIDSNLMDFEDKEVQKEGSSTGSNSNNSSVHDGENNESSGDQAKSHVTHVHCFNKVDELLNLLGRTNAQSEISAISKLRVRPNTSRKGFVPYKRCMAERENHNLLVTGEEMEMQQIRLSL* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1070 459 SUPERFAMILY Homeodomain-like 54 109 IPR009057 -
Lan2g1070 459 MobiDBLite consensus disorder prediction 126 153 - -
Lan2g1070 459 MobiDBLite consensus disorder prediction 182 216 - -
Lan2g1070 459 MobiDBLite consensus disorder prediction 10 47 - -
Lan2g1070 459 PANTHER PROTEIN REVEILLE 7-RELATED 30 446 - -
Lan2g1070 459 MobiDBLite consensus disorder prediction 1 47 - -
Lan2g1070 459 PANTHER SWI/SNF COMPLEX-RELATED 30 446 - -
Lan2g1070 459 ProSiteProfiles Myb-like domain profile. 55 105 IPR001005 -
Lan2g1070 459 MobiDBLite consensus disorder prediction 357 382 - -
Lan2g1070 459 MobiDBLite consensus disorder prediction 107 236 - -
Lan2g1070 459 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 109 IPR017930 -
Lan2g1070 459 SMART sant 59 107 IPR001005 -
Lan2g1070 459 ProSiteProfiles SANT domain profile. 58 109 IPR017884 -
Lan2g1070 459 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 58 107 IPR006447 GO:0003677
Lan2g1070 459 MobiDBLite consensus disorder prediction 351 382 - -
Lan2g1070 459 Gene3D - 62 109 - -
Lan2g1070 459 CDD SANT 62 105 IPR001005 -
Lan2g1070 459 MobiDBLite consensus disorder prediction 107 122 - -
Lan2g1070 459 Pfam Myb-like DNA-binding domain 60 103 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1070 Lan-Chr2 21959395 21962792 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan2g1070 Myb_DNA-binding 4.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1070 - - lang:109339594 902.894
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0234 4 3827610 3830366 Lan2g1070 2 21959395 21962792 LSH